RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 OR52R1Q8NGF1 315 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 OR2V1Q8NHB1 315 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 CLDND2Q8NHS1 167 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 UHMK1Q8TAS1 419 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 RNF217Q8TC41 542 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 UBASH3BQ8TF42 649 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 ZNF473Q8WTR7 871 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 WDR60Q8WVS4 1066 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 RGMAQ96B86 450 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 ZNF669Q96BR6 464 aaPredicted RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 EFHD2Q96C19 240 aaPredicted RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 C1GALT1C1Q96EU7 318 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 PTCD3Q96EY7 689 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 SERPINB12Q96P63 405 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 CAPS2Q9BXY5 557 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 MS4A8Q9BY19 250 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 TMEM185BQ9H7F4 350 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 ANKZF1Q9H8Y5 726 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 ZBTB26Q9HCK0 441 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 SDHAF3Q9NRP4 125 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 IARS2Q9NSE4 1012 aaKnown RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 C20orf96Q9NUD7 363 aaPredicted RBP6.3□□□□□ -1.4
VCAN-207ENST00000507162 GPRC5BQ9NZH0 403 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 ZDHHC2Q9UIJ5 367 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 MID2Q9UJV3 735 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 TFR2Q9UP52 801 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 TRAF6Q9Y4K3 522 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 TENM2Q9NT68 2774 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 COL7A1Q02388 2944 aa6.3□□□□□ -1.4
VCAN-207ENST00000507162 SH3PXD2BA1X283 911 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 DNAJC9-AS1A6NH13 148 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 NCF1BA6NI72 391 aaPredicted RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 NCF1CA8MVU1 366 aaPredicted RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 ATP6V1G2-DDX39BF2Z307 99 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ADAMDEC1O15204 470 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ST8SIA5O15466 376 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 TSPAN2O60636 221 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRAMEF4O60810 478 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 NME6O75414 186 aaPredicted RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRKD3O94806 890 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRSS23O95084 383 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 SCELO95171 688 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PGM3O95394 542 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ERCC1P07992 297 aaPredicted RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 NCF1P14598 390 aaPredicted RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 ZNF17P17021 662 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 FEN1P39748 380 aaKnown RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 MAGEA1P43355 309 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 IDH3GP51553 393 aaPredicted RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 UBASH3AP57075 661 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRR20EP86478 221 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRR20CP86479 221 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRR20DP86480 221 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRR20BP86481 221 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRR20AP86496 221 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 RIN1Q13671 783 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 DDX39BQ13838 428 aaKnown RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 RNPS1Q15287 305 aaKnown RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 FBXO48Q5FWF7 155 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 RBM20Q5T481 1227 aaKnown RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRAMEF9Q5VWM5 478 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 KHDRBS2Q5VWX1 349 aaKnown RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 ANKRD22Q5VYY1 191 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 C11orf63Q6NUN7 778 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 VHLLQ6RSH7 139 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 TDRPQ86YL5 185 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ZNF100Q8IYN0 542 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 UBE2J2Q8N2K1 259 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ZNF786Q8N393 782 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 RNF175Q8N4F7 328 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ZNF433Q8N7K0 673 aaPredicted RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 ALG3Q92685 438 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ESAMQ96AP7 390 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 TMIGD2Q96BF3 282 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 LRRC58Q96CX6 371 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 IQCDQ96DY2 449 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 CMTM7Q96FZ5 175 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 SLC35A4Q96G79 324 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ADGRG7Q96K78 797 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 NAT10Q9H0A0 1025 aaKnown RBP6.29□□□□□ -1.4
VCAN-207ENST00000507162 SLC52A3Q9NQ40 469 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 NTMQ9P121 344 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PAK5Q9P286 719 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 KLHL13Q9P2N7 655 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PRODH2Q9UF12 536 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 KLHL21Q9UJP4 597 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 VDAC3Q9Y277 283 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 PLLPQ9Y342 182 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 ASB4Q9Y574 426 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 SLC25A15Q9Y619 301 aa6.29□□□□□ -1.4
VCAN-207ENST00000507162 TRAV20A0A0B4J274 112 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 NPEPPSL1A6NEC2 478 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 TO15178 435 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 TMPRSS11DO60235 418 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 IGHV3-9P01782 118 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 GBAP04062 536 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 FAM58BPP0C7Q3 252 aa6.28□□□□□ -1.4
VCAN-207ENST00000507162 GAAP10253 952 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms