RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 KCNA10Q16322 511 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 ZSWIM7Q19AV6 140 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 NXPE4Q6UWF7 544 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 Q6ZTK2 550 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 OLIG3Q7RTU3 272 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 TAS1R1Q7RTX1 841 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 LMNTD1Q8N9Z9 388 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 OR5D16Q8NGK9 328 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC5A11Q8WWX8 675 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 TM4SF18Q96CE8 201 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 FAM46AQ96IP4 442 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 SPATA5L1Q9BVQ7 753 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 TDP1Q9NUW8 608 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 SPATA2Q9UM82 520 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 CHST2Q9Y4C5 530 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 BNIP3LO60238 219 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 ALDOBP05062 364 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 FGF2P09038 288 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 NR2F1P10589 423 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 LMAN2Q12907 356 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 LRFN4Q6PJG9 635 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 XAGE5Q8WWM1 108 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 THAP4Q8WY91 577 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 OSTF1Q92882 214 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 FOPNLQ96NB1 174 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 ZFP3Q96NJ6 502 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 OR51I1Q9H343 314 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 KCNK12Q9HB15 430 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 IL20Q9NYY1 176 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 PIPOXQ9P0Z9 390 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 BAIAP2Q9UQB8 552 aa15.99■□□□□ 0.15
SQSTM1-211ENST00000506690 LRRN3E7EW58 273 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 SOCS6O14544 535 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 GSTZ1O43708 216 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 TFP02787 698 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 URODP06132 367 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 ELNP15502 786 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 CD53P19397 219 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 TBXA2RP21731 343 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 RPS7P62081 194 aaKnown RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 STK11Q15831 433 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 CDC73Q6P1J9 531 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 SLITRK4Q8IW52 837 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 ACBD7Q8N6N7 88 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 RASGEF1AQ8N9B8 481 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 OR11G2Q8NGC1 345 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 ELMOD3Q96FG2 381 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 ART5Q96L15 291 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 FCRL4Q96PJ5 515 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 ALG8Q9BVK2 526 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 LRRN3Q9H3W5 708 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 C5AR2Q9P296 337 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 BACE2Q9Y5Z0 518 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PLXNA2O75051 1894 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PCP4L1A6NKN8 68 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PLPP1O14494 284 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 NUPL2O15504 423 aaKnown RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PRAF2O60831 178 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 ADAMTS4O75173 837 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 RB1P06400 928 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 LPLP06858 475 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 POU3F2P20265 443 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PPP2R1BP30154 601 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PGGHGQ32M88 737 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 Q6ZNB5 142 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 GET4Q7L5D6 327 aaPredicted RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PXKQ7Z7A4 578 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 HMGN2P46Q86SG4 172 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 STPG2Q8N412 459 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 FAM98AQ8NCA5 519 aaKnown RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 TTLQ8NG68 377 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 OR51G2Q8NGK0 314 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 OR5W2Q8NH69 310 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 PELOQ9BRX2 385 aaKnown RBP15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 BCL2L10Q9HD36 194 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 ZNF175Q9Y473 711 aa15.98■□□□□ 0.15
SQSTM1-211ENST00000506690 L7N2F9 121 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 B3GALNT1O75752 331 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 SC5DO75845 299 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 SNAPC5O75971 98 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 SLC2A10O95528 541 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 PROS1P07225 676 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CALCRP30988 508 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CD70P32970 193 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 BUD31P41223 144 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CTSOP43234 321 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CAP1Q01518 475 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 GNA13Q14344 377 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 RRM2BQ7LG56 351 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 HSD11B1LQ7Z5J1 315 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 BBS10Q8TAM1 723 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 TEX12Q9BXU0 123 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 CPEB1Q9BZB8 566 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 WDR26Q9H7D7 661 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 MCCC2Q9HCC0 563 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 TRIM36Q9NQ86 728 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 HINT3Q9NQE9 182 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 NPFFR2Q9Y5X5 522 aa15.97■□□□□ 0.15
SQSTM1-211ENST00000506690 MTCL1Q9Y4B5 1905 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms