RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TBXA2RP21731 343 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 CA6P23280 308 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 GCAP28676 217 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 LCN1P31025 176 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 OTX1P32242 354 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 CD80P33681 288 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 BDKRB1P46663 353 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 P2RY1P47900 373 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 FHITP49789 147 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 EFNB2P52799 333 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 GAS1P54826 345 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 RPL27P61353 136 aaKnown RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 HERV-K104P61576 105 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 PAX5Q02548 391 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 IRF8Q02556 426 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 POU3F1Q03052 451 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 MFGE8Q08431 387 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 EFEMP1Q12805 493 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 RCAN2Q14206 197 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 EIF2B1Q14232 305 aaKnown RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 GLYR1Q49A26 553 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 ACCSLQ4AC99 568 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 XKR6Q5GH73 641 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 MTX3Q5HYI7 312 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 PDSS1Q5T2R2 415 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 C6orf89Q6UWU4 347 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 BTNL3Q6UXE8 466 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 GFRALQ6UXV0 394 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 LRRC31Q6UY01 552 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF782Q6ZMW2 699 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 Q6ZVQ6 151 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 APTXQ7Z2E3 356 aaKnown RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 SNX20Q7Z614 316 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 RNF130Q86XS8 419 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 ERO1BQ86YB8 467 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 MMAAQ8IVH4 418 aaKnown RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 ATP6V0D2Q8N8Y2 350 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF383Q8NA42 475 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 FNDC5Q8NAU1 212 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 POC1AQ8NBT0 407 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR4D6Q8NGJ1 314 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR1B1Q8NGR6 318 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR13C9Q8NGT0 318 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 OLIG1Q8TAK6 271 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 CD99L2Q8TCZ2 262 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 NRGNQ92686 78 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 KIFAP3Q92845 792 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 OMA1Q96E52 524 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 SCMH1Q96GD3 660 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 URB1-AS1Q96HZ7 61 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF479Q96JC4 524 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 CLCC1Q96S66 551 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 LPAR4Q99677 370 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC6A7Q99884 636 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 HINT2Q9BX68 163 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 DUSP16Q9BY84 665 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 FRMD8P1Q9BZ68 369 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 COMMD4Q9H0A8 199 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLITRK2Q9H156 845 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 RHBGQ9H310 441 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 CPVLQ9H3G5 476 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 NT5MQ9NPB1 228 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 TXLNGQ9NUQ3 528 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 TMEM30AQ9NV96 361 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 TUBGCP4Q9UGJ1 667 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 ELF5Q9UKW6 265 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 NUP50Q9UKX7 468 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 SELENOKQ9Y6D0 94 aa3.22□□□□□ -1.89
HMGB1P22-201ENST00000505315 KAT6AQ92794 2004 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 GOLGA8QA0A0J9YX86 632 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 TRBV11-1A0A0K0K1C0 115 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 IQANK1A0A1B0GTG1 560 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 A0A1B0GUH1 482 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 SERINC4A6NH21 518 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 FBLL1A6NHQ2 334 aaKnown RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 INAFM1C9JVW0 142 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 NEDD8-MDP1E9PL57 170 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 SLC1A7O00341 560 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 NR5A2O00482 541 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 CYB561D2O14569 222 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 PPIHO43447 177 aaKnown RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 DUSP11O75319 330 aaKnown RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 LRCH4O75427 683 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 CRTAPO75718 401 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 OR2F2O95006 317 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 BAG4O95429 457 aaKnown RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 FGF19O95750 216 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 F10P00742 488 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 CA1P00915 261 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 PRKCGP05129 697 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 HOXC6P09630 235 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 LINC00271P0C7V0 271 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 UBCP0CG48 685 aaKnown RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 CDH1P12830 882 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 HOXB8P17481 243 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 MMP11P24347 488 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 ATP5A1P25705 553 aaKnown RBP3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 STOMP27105 288 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 CALML3P27482 149 aa3.21□□□□□ -1.9
HMGB1P22-201ENST00000505315 HOXD3P31249 432 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 316.1 ms