RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 JADE3Q92613 823 aa17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 GIMAP5Q96F15 307 aa17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 OTUB1Q96FW1 271 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 PPP3R2Q96LZ3 170 aa17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 PIGQQ9BRB3 760 aa17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 ROPN1BQ9BZX4 212 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 PIGMQ9H3S5 423 aa17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 ROPN1Q9HAT0 212 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 CCM2LQ9NUG4 571 aaPredicted RBP17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 ZNF337Q9Y3M9 751 aa17.56■□□□□ 0.4
UBE2D3-215ENST00000503418 A0A1W2PNV4 684 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 OR2M5A3KFT3 312 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 H0YC42 278 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 EMC8O43402 210 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 SKAP2O75563 359 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 SLU7O95391 586 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 CREB1P16220 341 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 DDX5P17844 614 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 MAPK1P28482 360 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 CPOXP36551 454 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 MAP3K8P41279 467 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 TPD52P55327 224 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 PRR5P85299 388 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 DAZAP2Q15038 168 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 FIGNL1Q6PIW4 674 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 APOOLQ6UXV4 268 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 CNEP1R1Q8N9A8 125 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 SLC16A11Q8NCK7 471 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 OR7A2PQ8NGA2 310 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 AENQ8WTP8 325 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 HOXB13Q92826 284 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 NINJ1Q92982 152 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 MTERF3Q96E29 417 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 YIPF4Q9BSR8 244 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 C1orf50Q9BV19 199 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 PINK1Q9BXM7 581 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 ST6GALNAC2Q9UJ37 374 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 PACSIN3Q9UKS6 424 aa17.55■□□□□ 0.4
UBE2D3-215ENST00000503418 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 SHISA8B8ZZ34 492 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 SCAMP2O15127 329 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 TNFSF13O75888 250 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 SMNDC1O75940 238 aaKnown RBP eCLIP17.54■□□□□ 0.43e-7■■□□□ 11.4
UBE2D3-215ENST00000503418 OXSR1O95747 527 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 ALOX5P09917 674 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 SUCLG1P53597 346 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 EEFSECP57772 596 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 EEF1A1P68104 462 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 DUSP5Q16690 384 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 ATP6AP1LQ52LC2 224 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 XKR7Q5GH72 579 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 EEF1A1P5Q5VTE0 462 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 OR2A2Q6IF42 318 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 MFSD12Q6NUT3 480 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 EMBQ6PCB8 327 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 LRIG3Q6UXM1 1119 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 GATSQ8NAP1 163 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 CHMP6Q96FZ7 201 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 C16orf58Q96GQ5 468 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 C3orf30Q96M34 536 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 ZCCHC3Q9NUD5 404 aaKnown RBP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 NTMQ9P121 344 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 ZDHHC2Q9UIJ5 367 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 VDAC3Q9Y277 283 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 PLEKHA6Q9Y2H5 1048 aa17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 V9GYY5 206 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-215ENST00000503418 LINC01387J3KSC0 135 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 NDUFB5O43674 189 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 KCNK2O95069 426 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 ARRB2P32121 409 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 SERPINB5P36952 375 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 RPL3P39023 403 aaKnown RBP17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 CLDN15P56746 228 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 CLDN20P56880 219 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 SIRPAP78324 504 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 VWA1Q6PCB0 445 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 COX18Q8N8Q8 333 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 FNDC5Q8NAU1 212 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 OR4C3Q8NH37 302 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 FIG4Q92562 907 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 FAM120BQ96EK7 910 aaKnown RBP17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 SIRT3Q9NTG7 399 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 ATP6V1HQ9UI12 483 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 EDARQ9UNE0 448 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 SNX8Q9Y5X2 465 aa17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 HRNRQ86YZ3 2850 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-215ENST00000503418 IGLV3-32A0A0A0MS00 114 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 A0A1W2PRB8 838 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 SH3D21A4FU49 640 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 A8MXE2 369 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 ALG1L2C9J202 215 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 TNFRSF21O75509 655 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 CRHP06850 196 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 BPGMP07738 259 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 HPGDP15428 266 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 DNASE1P24855 282 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 PRIM2P49643 509 aa17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 RPS3AP61247 264 aaKnown RBP17.52■□□□□ 0.4
UBE2D3-215ENST00000503418 LASP1Q14847 261 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms