RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 GTPBP3Q969Y2 492 aaKnown RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 EFHD2Q96C19 240 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ELP4Q96EB1 424 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 PIK3IP1Q96FE7 263 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 APIPQ96GX9 242 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 Q96MF0 132 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM111AQ96PZ2 611 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 FMO2Q99518 471 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 TACO1Q9BSH4 297 aaKnown RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 PINK1Q9BXM7 581 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 ACPTQ9BZG2 426 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 DSN1Q9H410 356 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 KLHL28Q9NXS3 571 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 C6orf203Q9P0P8 240 aaPredicted RBP5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 SENP1Q9P0U3 644 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 EMC9Q9Y3B6 208 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 OR10H1Q9Y4A9 318 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 HIVEP2P31629 2446 aa5.48□□□□□ -1.53
LSM3P4-201ENST00000502948 GOLGA8QA0A0J9YX86 632 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ESYT3A0FGR9 886 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 GOLGA8OA6NCC3 632 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 GOLGA8NF8WBI6 632 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 H7C1Q1 480 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 GOLGA8RI6L899 631 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 OVOL3O00110 214 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 KIF2AO00139 706 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 TLX2O43763 284 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 DLX3O60479 287 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CRLF1O75462 422 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CNOT4O95628 575 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ANGPTL1O95841 491 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 THBDP07204 575 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ELK4P28324 431 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ECHS1P30084 290 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 EIF1P41567 113 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CLDN20P56880 219 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 PPP2R2BQ00005 443 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CAPRIN1Q14444 709 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC29A2Q14542 456 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 KIAA0040Q15053 153 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 RNPS1Q15287 305 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 SGCBQ16585 318 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 WHAMMP3Q1A5X7 153 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CTU2Q2VPK5 515 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 SGO1Q5FBB7 561 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 PDSS1Q5T2R2 415 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CPTPQ5TA50 214 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 OR5M10Q6IEU7 315 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 HEPHL1Q6MZM0 1159 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM180BQ6P0A1 224 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 STAC2Q6ZMT1 411 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF704Q6ZNC4 412 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 C22orf34Q6ZV56 151 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 TRMT10CQ7L0Y3 403 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 MTERF4Q7Z6M4 381 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 TRABD2AQ86V40 505 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 TDRPQ86YL5 185 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CIARTQ8N365 385 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CNEP1R1Q8N9A8 125 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CDRT4Q8N9R6 151 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ZNF610Q8N9Z0 462 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 STEAP2Q8NFT2 490 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 CEP70Q8NHQ1 597 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 RDH11Q8TC12 318 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 DUSP19Q8WTR2 217 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 OIT3Q8WWZ8 545 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 KAT2AQ92830 837 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 EXOSC8Q96B26 276 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 MTERF3Q96E29 417 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 FCRL1Q96LA6 429 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 AMDHD1Q96NU7 426 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 TMEM237Q96Q45 408 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 BBS4Q96RK4 519 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 TBL1XR1Q9BZK7 514 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 OPN3Q9H1Y3 402 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 GLIPR2Q9H4G4 154 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ANKRA2Q9H9E1 313 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 L2HGDHQ9H9P8 463 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 NGBQ9NPG2 151 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 MIEF1Q9NQG6 463 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 RRAGDQ9NQL2 400 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 PFDN4Q9NQP4 134 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ACSS1Q9NUB1 689 aaPredicted RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 DDX18Q9NVP1 670 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 TMEM216Q9P0N5 145 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 DCDC2Q9UHG0 476 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 MCTS1Q9ULC4 181 aaKnown RBP5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 PYCARDQ9ULZ3 195 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 ACTL7BQ9Y614 415 aa5.47□□□□□ -1.53
LSM3P4-201ENST00000502948 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 EXOC1LA0A1B0GW35 172 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 GJE1A6NN92 205 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 H3BML4 177 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 ETV2O00321 342 aaPredicted RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 HS3ST1O14792 307 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 SCO2O43819 266 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 GCM2O75603 506 aaPredicted RBP5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 AQP8O94778 261 aa5.46□□□□□ -1.54
LSM3P4-201ENST00000502948 JUNP05412 331 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms