RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SMG9Q9H0W8 520 aaKnown RBP12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 BRD9Q9H8M2 597 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 TMEM138Q9NPI0 162 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 ZNF763Q0D2J5 394 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 VASNQ6EMK4 673 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 OR4D10Q8NGI6 311 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 FAM46AQ96IP4 442 aaKnown RBP12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 MED20Q9H944 212 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 PPP2R3BQ9Y5P8 575 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 GNSP15586 552 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 TBXA2RP21731 343 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 PRPH2P23942 346 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 MRPS6P82932 125 aaKnown RBP12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 TMEM255AQ5JRV8 349 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 CD200R1LQ6Q8B3 271 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 RNF165Q6ZSG1 346 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 BTBD1Q9H0C5 482 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 CXorf36Q9H7Y0 433 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 AP1M2Q9Y6Q5 423 aa12.26□□□□□ -0.45
GAPVD1-220ENST00000497580 OR2W5A6NFC9 320 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 TUBAL3A6NHL2 446 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 REM1O75628 298 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 IL3P08700 152 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ACP5P13686 325 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 RPL17P18621 184 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 HNF1BP35680 557 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 RAB13P51153 203 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ARF5P84085 180 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ZNF155Q12901 538 aaPredicted RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 IKZF1Q13422 519 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 EOGTQ5NDL2 527 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 LURAP1LQ8IV03 231 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 C2orf73Q8N5S3 287 aaPredicted RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 OR5D16Q8NGK9 328 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 SPATA5L1Q9BVQ7 753 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC12A9Q9BXP2 914 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 TMEM38AQ9H6F2 299 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 TDP1Q9NUW8 608 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC6A5Q9Y345 797 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 GBF1Q92538 1859 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 PLSCR5A0PG75 271 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 HMGN1P05114 100 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 FABP1P07148 127 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 NR2F1P10589 423 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 PCSK2P16519 638 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 RPL9P32969 192 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 SPAM1P38567 509 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 NSG1P42857 185 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 MANFP55145 182 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 SEC61A1P61619 476 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 STXBP1P61764 594 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 PAN3Q58A45 887 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ZCCHC12Q6PEW1 402 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 TMEM185AQ8NFB2 350 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 OR5M1Q8NGP8 315 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 OR51Q1Q8NH59 317 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 KCND3Q9UK17 655 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 DOCK3Q8IZD9 2030 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ABHD14A-ACY1A0A1B0GW23 586 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 GPR37L1O60883 481 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ACHEP22303 614 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC6A12P48065 614 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 RFX3P48380 749 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 GAS1P54826 345 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 PCBP3P57721 371 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 EEF1A2Q05639 463 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 SYPL1Q16563 259 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 PLBD1Q6P4A8 553 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 KLK6Q92876 244 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 CLP1Q92989 425 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 IFT27Q9BW83 186 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 QRSL1Q9H0R6 528 aaKnown RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 DNTTIP1Q9H147 329 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 FGF20Q9NP95 211 aaPredicted RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 BIN3Q9NQY0 253 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 ING1Q9UK53 422 aaPredicted RBP12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 USP34Q70CQ2 3546 aa12.25□□□□□ -0.45
GAPVD1-220ENST00000497580 F11P03951 625 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 GPR4P46093 362 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 CCR8P51685 355 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 PRSS53Q2L4Q9 553 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 BEX5Q5H9J7 111 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 ZNF322Q6U7Q0 402 aaPredicted RBP12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 MACC1Q6ZN28 852 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 CXXC5Q7LFL8 322 aaKnown RBP12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 BRI3BPQ8WY22 251 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 RSPO3Q9BXY4 272 aaPredicted RBP12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 BHLHE41Q9C0J9 482 aaPredicted RBP12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC6A16Q9GZN6 736 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 NIT2Q9NQR4 276 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 CTSFQ9UBX1 484 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 PURGQ9UJV8 347 aaKnown RBP12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 AK6Q9Y3D8 172 aaKnown RBP12.24□□□□□ -0.45
GAPVD1-220ENST00000497580 IRGMA1A4Y4 181 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms