RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 Q6ZSR9 355 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 CAMKMTQ7Z624 323 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 EXOC3L1Q86VI1 746 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 SLC9A6Q92581 669 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 MBD6Q96DN6 1003 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 STARD4Q96DR4 205 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
FN1-226ENST00000496542 ZBED6CLQ96FA7 236 aaPredicted RBP11.68□□□□□ -0.54
FN1-226ENST00000496542 FAM111AQ96PZ2 611 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 PIGQQ9BRB3 760 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 TUBB1Q9H4B7 451 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 REEP4Q9H6H4 257 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 PLEKHF2Q9H8W4 249 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 SH3BP4Q9P0V3 963 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 BAIAP2L1Q9UHR4 511 aa11.68□□□□□ -0.54
FN1-226ENST00000496542 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 TMEM233B4DJY2 109 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 NPIPB8E9PQR5 432 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 LINC01387J3KSC0 135 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 MSTNO14793 375 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 CASKO14936 926 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 TRIM13O60858 407 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 ACP2P11117 423 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 MANFP55145 182 aaKnown RBP11.67□□□□□ -0.54
FN1-226ENST00000496542 CLDN20P56880 219 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 FOXD4Q12950 439 aaPredicted RBP11.67□□□□□ -0.54
FN1-226ENST00000496542 PON3Q15166 354 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 KANK2Q63ZY3 851 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 PPP4R4Q6NUP7 873 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 APOOLQ6UXV4 268 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 BTLAQ7Z6A9 289 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 DDIASQ8IXT1 998 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 CDRT4Q8N9R6 151 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 GATSQ8NAP1 163 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 NUP43Q8NFH3 380 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 OR2W6PQ8NHA6 318 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 CEP70Q8NHQ1 597 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 OTUB1Q96FW1 271 aaPredicted RBP11.67□□□□□ -0.54
FN1-226ENST00000496542 PGM2Q96G03 612 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 ZNF764Q96H86 408 aaPredicted RBP11.67□□□□□ -0.54
FN1-226ENST00000496542 APOPT1Q96IL0 206 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 ZNF845Q96IR2 970 aaPredicted RBP11.67□□□□□ -0.54
FN1-226ENST00000496542 FCRL1Q96LA6 429 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 MS4A4EQ96PG1 132 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 TRMOQ9BU70 441 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 OPN3Q9H1Y3 402 aaPredicted RBP11.67□□□□□ -0.54
FN1-226ENST00000496542 NDRG3Q9UGV2 375 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 EIF3LQ9Y262 564 aaKnown RBP11.67□□□□□ -0.54
FN1-226ENST00000496542 VDAC3Q9Y277 283 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 TESMINQ9Y4I5 508 aa11.67□□□□□ -0.54
FN1-226ENST00000496542 VPS13CQ709C8 3753 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 IGLV3-32A0A0A0MS00 114 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 A0A1W2PPR1 153 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 LSM1O15116 133 aaKnown RBP11.66□□□□□ -0.54
FN1-226ENST00000496542 TBX19O60806 448 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 TNFRSF21O75509 655 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 NKX2-2O95096 273 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 CHRNGP07510 517 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 ALDH3A1P30838 453 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 CD79BP40259 229 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 KIR2DL2P43627 348 aaPredicted RBP11.66□□□□□ -0.54
FN1-226ENST00000496542 RPS3AP61247 264 aaKnown RBP11.66□□□□□ -0.54
FN1-226ENST00000496542 PRR5P85299 388 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 FAM27E3Q08E93 113 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 C17orf67Q0P5P2 114 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 PDE7AQ13946 482 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 RFTN2Q52LD8 501 aaPredicted RBP11.66□□□□□ -0.54
FN1-226ENST00000496542 FIGNL1Q6PIW4 674 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 TWIST2Q8WVJ9 160 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 JADE3Q92613 823 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 MECRQ9BV79 373 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 KLHL28Q9NXS3 571 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 GIMAP2Q9UG22 337 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 TMED5Q9Y3A6 229 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 DNAJC15Q9Y5T4 150 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 AP4B1Q9Y6B7 739 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 PRR14LQ5THK1 2151 aa11.66□□□□□ -0.54
FN1-226ENST00000496542 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 UQCRHLA0A096LP55 91 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 EIF1AYO14602 144 aaKnown RBP11.65□□□□□ -0.54
FN1-226ENST00000496542 PIP5K1BO14986 540 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 EMC8O43402 210 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 NDUFB5O43674 189 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 OXSR1O95747 527 aaPredicted RBP11.65□□□□□ -0.54
FN1-226ENST00000496542 ALOX5P09917 674 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 BCKDHAP12694 445 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 POU2F1P14859 743 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 HPCAL1P37235 193 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 MAP3K8P41279 467 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 ASMTP46597 345 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 EIF1AXP47813 144 aaKnown RBP11.65□□□□□ -0.54
FN1-226ENST00000496542 KCNJ5P48544 419 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 ADAM8P78325 824 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 SGCBQ16585 318 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 DUSP5Q16690 384 aa11.65□□□□□ -0.54
FN1-226ENST00000496542 GLYR1Q49A26 553 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms