RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ARSKQ6UWY0 536 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 CDH24Q86UP0 819 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 COX18Q8N8Q8 333 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 C9orf106Q8NAJ2 232 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 OR7A2PQ8NGA2 310 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 OR56A1Q8NGH5 318 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 PIK3R3Q92569 461 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 SLC9A6Q92581 669 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 TUBGCP3Q96CW5 907 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 FAM120BQ96EK7 910 aaKnown RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 C1GALT1C1Q96EU7 318 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 PGM2Q96G03 612 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 STACQ99469 402 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 PRPF18Q99633 342 aaKnown RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 G6PC3Q9BUM1 346 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 DUSP22Q9NRW4 184 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 SIRT3Q9NTG7 399 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 ZCCHC3Q9NUD5 404 aaKnown RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 GIN1Q9NXP7 522 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 NOP53Q9NZM5 478 aaKnown RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 GIMAP2Q9UG22 337 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 EIF3LQ9Y262 564 aaKnown RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 RPH3AQ9Y2J0 694 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-213ENST00000496347 HIVEP1P15822 2718 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 PCNX3Q9H6A9 2034 aa14.24□□□□□ -0.13
HDAC4-213ENST00000496347 C17orf51A8MQB3 221 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 EEF1E1-BLOC1S5C9J1V9 151 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 ALG1L2C9J202 215 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 EEF1E1O43324 174 aaKnown RBP14.23□□□□□ -0.13
HDAC4-213ENST00000496347 IGKV1D-16P01601 117 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 KRT16P08779 473 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 ALOX5P09917 674 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 ACP2P11117 423 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 ZNF17P17021 662 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 POU3F2P20265 443 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-213ENST00000496347 PRKAG1P54619 331 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 KRTAP10-9P60411 292 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 EEF1A1P68104 462 aaKnown RBP14.23□□□□□ -0.13
HDAC4-213ENST00000496347 SORDQ00796 357 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 SRYQ05066 204 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 C17orf67Q0P5P2 114 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 DUSP5Q16690 384 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 GRAMD1BQ3KR37 738 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 GLYR1Q49A26 553 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-213ENST00000496347 CEP85LQ5SZL2 805 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 EEF1A1P5Q5VTE0 462 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 IL23RQ5VWK5 629 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 CAMKMTQ7Z624 323 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 EXOC3L1Q86VI1 746 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 TMEM200AQ86VY9 491 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 GRAMD2AQ8IUY3 354 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 SLC16A11Q8NCK7 471 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 FBXO30Q8TB52 745 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 SFXN5Q8TD22 340 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 JADE3Q92613 823 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 MOAP1Q96BY2 351 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 PIGQQ9BRB3 760 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 RTN4RQ9BZR6 473 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 BHLHE41Q9C0J9 482 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-213ENST00000496347 DSN1Q9H410 356 aa14.23□□□□□ -0.13
HDAC4-213ENST00000496347 A0A1W2PRB8 838 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 SOX30O94993 753 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 KCNK2O95069 426 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 RCBTB2O95199 551 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 OXSR1O95747 527 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-213ENST00000496347 ANGPTL1O95841 491 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 LAMP1P11279 417 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 PEPDP12955 493 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 HK1P19367 917 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 TCEA1P23193 301 aaKnown RBP14.22□□□□□ -0.13
HDAC4-213ENST00000496347 KIR2DL3P43628 341 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 EEFSECP57772 596 aaKnown RBP14.22□□□□□ -0.13
HDAC4-213ENST00000496347 ABCE1P61221 599 aaKnown RBP14.22□□□□□ -0.13
HDAC4-213ENST00000496347 PDCD2Q16342 344 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-213ENST00000496347 LSM12Q3MHD2 195 aaKnown RBP14.22□□□□□ -0.13
HDAC4-213ENST00000496347 FLYWCH1Q4VC44 716 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 MARCH3Q86UD3 253 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 KIF18BQ86Y91 864 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 MISPQ8IVT2 679 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 RIMKLAQ8IXN7 391 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 LRRC34Q8IZ02 419 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 MEIOBQ8N635 442 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 ZNF781Q8N8C0 355 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 OR5P2Q8WZ92 322 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 COQ8BQ96D53 544 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 BTBD2Q9BX70 525 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 CENPHQ9H3R5 247 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 JKAMPQ9P055 326 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 MED11Q9P086 117 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 HAO1Q9UJM8 370 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-213ENST00000496347 RAP2CQ9Y3L5 183 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 SNX8Q9Y5X2 465 aa14.22□□□□□ -0.13
HDAC4-213ENST00000496347 MPDZO75970 2070 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 A0A087WZY1 265 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 HMGN2P05204 90 aaKnown RBP14.21□□□□□ -0.13
HDAC4-213ENST00000496347 HPGDP15428 266 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 EFNA1P20827 205 aaPredicted RBP14.21□□□□□ -0.13
HDAC4-213ENST00000496347 TBXA2RP21731 343 aa14.21□□□□□ -0.13
HDAC4-213ENST00000496347 STARP49675 285 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms