RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 OSTF1Q92882 214 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 RIT1Q92963 219 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 UCN3Q969E3 161 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 RFKQ969G6 155 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 SLC35B4Q969S0 331 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CLDN23Q96B33 292 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 MMABQ96EY8 250 aaPredicted RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 SLC35A4Q96G79 324 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 C16orf58Q96GQ5 468 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 SLC41A3Q96GZ6 507 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 HS6ST2Q96MM7 605 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 TGM7Q96PF1 710 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ZNF559Q9BR84 538 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ORAI3Q9BRQ5 295 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DCUN1D5Q9BTE7 237 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 NDC1Q9BTX1 674 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 LMF2Q9BU23 707 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 FUNDC2Q9BWH2 189 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ZNF350Q9GZX5 532 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DUSP15Q9H1R2 295 aaPredicted RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 ERVMER34-1Q9H9K5 563 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 TMEM27Q9HBJ8 222 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 SLC25A19Q9HC21 320 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ACOT13Q9NPJ3 140 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 ERVK-18Q9QC07 812 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 FTSJ1Q9UET6 329 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 PSORS1C1Q9UIG5 152 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ENPP5Q9UJA9 477 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 A4GNTQ9UNA3 340 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ERGIC3Q9Y282 383 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 SIT1Q9Y3P8 196 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 RP1P56715 2156 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 FER1L5A0AVI2 2057 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CHD9Q3L8U1 2897 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 CACNA1EQ15878 2313 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 A0A0A6YYC8 382 aaPredicted RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 AGAP5A6NIR3 686 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 CLDN24A6NM45 220 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 I3L1I5 382 aaPredicted RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 CYR61O00622 381 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 B4GAT1O43505 415 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 NKX2-2O95096 273 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 GABARAPO95166 117 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 WNT1P04628 370 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 RPLP0P05388 317 aaKnown RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 NID1P14543 1247 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 GLB1P16278 677 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 BMP7P18075 431 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 MYL12AP19105 171 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 PCMT1P22061 227 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 GABRA3P34903 492 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 TRHRP34981 398 aaPredicted RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 STT3AP46977 705 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 LSSP48449 732 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 PSPHP78330 225 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 HSD11B2P80365 405 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 ID2Q02363 134 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 EMX1Q04741 257 aaPredicted RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 FOXD4Q12950 439 aaPredicted RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 NFATC3Q12968 1075 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 PIN1Q13526 163 aaPredicted RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 MAPK11Q15759 364 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 DUSP5Q16690 384 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 ENTPD8Q5MY95 495 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 TMEM201Q5SNT2 666 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 SYT6Q5T7P8 510 aaPredicted RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 FHL5Q5TD97 284 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 MFSD4BQ5TF39 518 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 UBE2UQ5VVX9 321 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 C12orf73Q69YU5 71 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 XAF1Q6GPH4 301 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 TYW3Q6IPR3 259 aaKnown RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 SLC27A4Q6P1M0 643 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 ZNF613Q6PF04 617 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 OGFOD3Q6PK18 319 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 ZNF836Q6ZNA1 936 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 LINC00299Q6ZSB3 139 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 RASSF6Q6ZTQ3 369 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 BTLAQ7Z6A9 289 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 TSEN54Q7Z6J9 526 aaKnown RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 CMIPQ8IY22 773 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 RNF113BQ8IZP6 322 aaKnown RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 SLC43A2Q8N370 569 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 CLDN22Q8N7P3 220 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 ZNF614Q8N883 585 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 SLC16A11Q8NCK7 471 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 OR7G1Q8NGA0 311 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 OR52R1Q8NGF1 315 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 WDR36Q8NI36 951 aaKnown RBP6.44□□□□□ -1.38
USP39-219ENST00000496047 SLC7A13Q8TCU3 470 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 FAR1Q8WVX9 515 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 S100ZQ8WXG8 99 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 DNASE2BQ8WZ79 361 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 BORCS5Q969J3 196 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 PEX11GQ96HA9 241 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 OR1F2PQ96R84 312 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 SDF2Q99470 211 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 DPYSL5Q9BPU6 564 aa6.44□□□□□ -1.38
USP39-219ENST00000496047 CNPPD1Q9BV87 410 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms