RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 IL11P20809 199 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 SSTR4P31391 388 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 CHN2P52757 468 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 ARFIP2P53365 341 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 SUCLG1P53597 346 aaKnown RBP8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 SLC16A1P53985 500 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 CLDN15P56746 228 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 PLCXD2Q0VAA5 305 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 SLBPQ14493 270 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 P2RY6Q15077 328 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 NNATQ16517 81 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 FAM205BPQ63HN1 556 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 UGT3A1Q6NUS8 523 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 NEPROQ6NW34 567 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 SLC22A25Q6T423 547 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 KRT74Q7RTS7 529 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 THOC6Q86W42 341 aaKnown RBP8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 PRR18Q8N4B5 295 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 SRFBP1Q8NEF9 429 aaKnown RBP8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 C17orf47Q8NEP4 570 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 OR4K17Q8NGC6 315 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 EEF1AKMT1Q8WVE0 214 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 TANKQ92844 425 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 HGDQ93099 445 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 VPS39Q96JC1 886 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 FOXN4Q96NZ1 517 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 RPF2Q9H7B2 306 aaKnown RBP8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 FBXO6Q9NRD1 293 aaPredicted RBP8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 FBXO34Q9NWN3 711 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 USP22Q9UPT9 525 aa8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 V9GYY5 206 aaPredicted RBP8.5□□□□□ -1.05
SMARCAL1-213ENST00000496037 J3QW42 95 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 AP3B1O00203 1094 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 AHCYL1O43865 530 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 TMEM127O75204 238 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 IFNB1P01574 187 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 F7P08709 466 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 TLX1P31314 330 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 GATA4P43694 442 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 DVL1P1P54792 670 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 DSCR4P56555 118 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 B3GALT5-AS1P59052 145 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 NR1I3Q14994 352 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 STK11Q15831 433 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 PRSS53Q2L4Q9 553 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 ASTE1Q2TB18 679 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 SFRP5Q5T4F7 317 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 C6orf163Q5TEZ5 329 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 ZNF549Q6P9A3 640 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 UGT2A3Q6UWM9 527 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 FRMD7Q6ZUT3 714 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 EXOC3L1Q86VI1 746 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 MRPL41Q8IXM3 137 aaKnown RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 SVOPLQ8N434 492 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 METTL25Q8N6Q8 603 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 ACOT4Q8N9L9 421 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 ADIPOR1Q96A54 375 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 OMA1Q96E52 524 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 LINGO1Q96FE5 620 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 APIPQ96GX9 242 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 KIFC1Q9BW19 673 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 NAT10Q9H0A0 1025 aaKnown RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 PRDM7Q9NQW5 492 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 GLRX2Q9NS18 164 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 MS4A12Q9NXJ0 267 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 EHD3Q9NZN3 535 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 MCTS1Q9ULC4 181 aaKnown RBP8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 SLC22A14Q9Y267 594 aa8.49□□□□□ -1.05
SMARCAL1-213ENST00000496037 E7EQL1 145 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 ZIC3O60481 467 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 GCM2O75603 506 aaPredicted RBP8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 SLU7O95391 586 aaKnown RBP8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 GYPCP04921 128 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 TUBBP07437 444 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 C1GALT1C1LP0DN25 315 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 HKR1P10072 659 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 ATP6V1B1P15313 513 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 GNAZP19086 355 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 EPHA1P21709 976 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 HIST1H1TP22492 207 aaPredicted RBP8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 ATP5A1P25705 553 aaKnown RBP8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 SSR2P43308 183 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 HSPA7P48741 367 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 NPY2RP49146 381 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 ALDH9A1P49189 494 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 MTNR1BP49286 362 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 CDH15P55291 814 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 CLDN20P56880 219 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 HMGCS1Q01581 520 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 KIF5AQ12840 1032 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 THOC5Q13769 683 aaKnown RBP8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 PPA1Q15181 289 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 AP5B1Q2VPB7 878 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 OR5M10Q6IEU7 315 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 C11orf63Q6NUN7 778 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 ZNF544Q6NX49 715 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 SSX8Q7RTT4 187 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 GLCCI1Q86VQ1 547 aa8.48□□□□□ -1.05
SMARCAL1-213ENST00000496037 PPIL6Q8IXY8 311 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms