RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 RNF122Q9H9V4 155 aa11.36□□□□□ -0.59
SKA1-205ENST00000494518 Q9N2J8 555 aa11.36□□□□□ -0.59
SKA1-205ENST00000494518 SDHAF3Q9NRP4 125 aa11.36□□□□□ -0.59
SKA1-205ENST00000494518 FAM120CQ9NX05 1096 aaKnown RBP11.36□□□□□ -0.59
SKA1-205ENST00000494518 ABCG2Q9UNQ0 655 aa11.36□□□□□ -0.59
SKA1-205ENST00000494518 C19orf53Q9UNZ5 99 aaPredicted RBP11.36□□□□□ -0.59
SKA1-205ENST00000494518 A0A087WV62 115 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 KIAA1324LA8MWY0 1029 aaPredicted RBP11.35□□□□□ -0.59
SKA1-205ENST00000494518 UBFD1O14562 309 aaKnown RBP11.35□□□□□ -0.59
SKA1-205ENST00000494518 TNFRSF21O75509 655 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 UTS2O95399 124 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 IL33O95760 270 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 IGKV1D-16P01601 117 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 THBDP07204 575 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 FPR1P21462 350 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 TBXA2RP21731 343 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 PKNOX1P55347 436 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 RPS3AP61247 264 aaKnown RBP11.35□□□□□ -0.59
SKA1-205ENST00000494518 PSPHP78330 225 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 HSPB3Q12988 150 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 GANABQ14697 944 aaKnown RBP11.35□□□□□ -0.59
SKA1-205ENST00000494518 WHAMMP3Q1A5X7 153 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 CYP27C1Q4G0S4 372 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 ALKBH2Q6NS38 261 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 GALNT18Q6P9A2 607 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 ZNF551Q7Z340 670 aaPredicted RBP11.35□□□□□ -0.59
SKA1-205ENST00000494518 SZRD1Q7Z422 152 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 GGNQ86UU5 652 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 EXOC3L1Q86VI1 746 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 MMGT1Q8N4V1 131 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 CEP112Q8N8E3 955 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 L3HYPDHQ96EM0 354 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 AMDHD1Q96NU7 426 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 TBL1XR1Q9BZK7 514 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 TMEM185BQ9H7F4 350 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 ELOVL5Q9NYP7 299 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 NFU1Q9UMS0 254 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 ZNF175Q9Y473 711 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 ABCA1O95477 2261 aa11.35□□□□□ -0.59
SKA1-205ENST00000494518 CHD3Q12873 2000 aaKnown RBP11.35□□□□□ -0.59
SKA1-205ENST00000494518 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.34□□□□□ -0.59
SKA1-205ENST00000494518 CCDC151A5D8V7 595 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 FAM171A2A8MVW0 826 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 CRCPO75575 148 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 PSMG1O95456 288 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 ANGPTL1O95841 491 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 PLGP00747 810 aaPredicted RBP11.34□□□□□ -0.59
SKA1-205ENST00000494518 PLAUP00749 431 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 CD8BP10966 210 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 NID1P14543 1247 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 PTH2RP49190 550 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 CLK3P49761 638 aaKnown RBP11.34□□□□□ -0.59
SKA1-205ENST00000494518 GUSBP1Q15486 140 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 ZNHIT3Q15649 155 aaPredicted RBP11.34□□□□□ -0.59
SKA1-205ENST00000494518 TIFABQ6ZNK6 161 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 C20orf204Q6ZNR8 217 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 FAM214BQ7L5A3 538 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 WFDC8Q8IUA0 241 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 SLC22A9Q8IVM8 553 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 OR2L13Q8N349 312 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 METTL25Q8N6Q8 603 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 CIDECQ96AQ7 238 aaPredicted RBP11.34□□□□□ -0.59
SKA1-205ENST00000494518 ELP4Q96EB1 424 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 OTUB1Q96FW1 271 aaPredicted RBP11.34□□□□□ -0.59
SKA1-205ENST00000494518 EGLN2Q96KS0 407 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 KLHDC3Q9BQ90 382 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 LMF2Q9BU23 707 aaKnown RBP11.34□□□□□ -0.59
SKA1-205ENST00000494518 TSPYL1Q9H0U9 437 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 TNFRSF12AQ9NP84 129 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 MYNNQ9NPC7 610 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 TBK1Q9UHD2 729 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 EMCNQ9ULC0 261 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 STK38LQ9Y2H1 464 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 PTGDR2Q9Y5Y4 395 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 CR1P17927 2039 aa11.34□□□□□ -0.59
SKA1-205ENST00000494518 FBN3Q75N90 2809 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 ALPK2Q86TB3 2170 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 INAFM1C9JVW0 142 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 KCNH1O95259 989 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 EFNA1P20827 205 aaPredicted RBP11.33□□□□□ -0.6
SKA1-205ENST00000494518 GPC1P35052 558 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 RNF144AP50876 292 aaPredicted RBP11.33□□□□□ -0.6
SKA1-205ENST00000494518 PRKAG1P54619 331 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 NR1H2P55055 460 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 CTBP2P56545 445 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 NOXRED1Q6NXP6 359 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 FIGNL1Q6PIW4 674 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 ZAR1Q86SH2 424 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 LRRN4CLQ8ND94 238 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 OR10D3Q8NH80 312 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.33□□□□□ -0.6
SKA1-205ENST00000494518 GPR151Q8TDV0 419 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 SH3YL1Q96HL8 342 aaPredicted RBP11.33□□□□□ -0.6
SKA1-205ENST00000494518 MDFIQ99750 246 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 BDH2Q9BUT1 245 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 C12orf49Q9H741 205 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 SIRT5Q9NXA8 310 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 MRTO4Q9UKD2 239 aaKnown RBP11.33□□□□□ -0.6
SKA1-205ENST00000494518 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
SKA1-205ENST00000494518 EMC9Q9Y3B6 208 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms