RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PSG6Q00889 435 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 CAPRIN1Q14444 709 aaKnown RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 CYP27C1Q4G0S4 372 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 UNC50Q53HI1 259 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ZNF678Q5SXM1 525 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ZNF619Q8N2I2 560 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 GPR151Q8TDV0 419 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 JADE3Q92613 823 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 CAVIN3Q969G5 261 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 GTPBP3Q969Y2 492 aaKnown RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 SH3YL1Q96HL8 342 aaPredicted RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 REXO5Q96IC2 774 aaKnown RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 ZNF382Q96SR6 550 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 GSX2Q9BZM3 304 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ACTR6Q9GZN1 396 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 C3orf14Q9HBI5 128 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 MID1IP1Q9NPA3 183 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 ZDHHC18Q9NUE0 388 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 FAM120CQ9NX05 1096 aaKnown RBP8.65□□□□□ -1.02
UBR4-216ENST00000494503 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 STK38LQ9Y2H1 464 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 AP4B1Q9Y6B7 739 aa8.65□□□□□ -1.02
UBR4-216ENST00000494503 GXYLT2A0PJZ3 443 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 TNFSF11O14788 317 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 CXCL13O43927 109 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 FADS1O60427 444 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 URI1O94763 535 aaPredicted RBP8.64□□□□□ -1.03
UBR4-216ENST00000494503 IL33O95760 270 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 PLAUP00749 431 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 CGAP01215 116 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 ENO1P06733 434 aaKnown RBP8.64□□□□□ -1.03
UBR4-216ENST00000494503 SNRPAP09012 282 aaKnown RBP8.64□□□□□ -1.03
UBR4-216ENST00000494503 PPP3CBP16298 524 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 SLC6A8P48029 635 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 C17orf67Q0P5P2 114 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 LCP2Q13094 533 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 CTU2Q2VPK5 515 aaKnown RBP8.64□□□□□ -1.03
UBR4-216ENST00000494503 GRAMD1BQ3KR37 738 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 C22orf34Q6ZV56 151 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 EXOC3L1Q86VI1 746 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
UBR4-216ENST00000494503 METTL25Q8N6Q8 603 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 OR6K3Q8NGY3 331 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 OR10D3Q8NH80 312 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 PPP1R14CQ8TAE6 165 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 DCAKDQ8WVC6 231 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 PIK3R3Q92569 461 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 AKAP1Q92667 903 aaKnown RBP eCLIP8.64□□□□□ -1.03
UBR4-216ENST00000494503 GMPPAQ96IJ6 420 aaPredicted RBP8.64□□□□□ -1.03
UBR4-216ENST00000494503 RTN4RQ9BZR6 473 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 TSPYL1Q9H0U9 437 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 TMEM216Q9P0N5 145 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 ABCA1O95477 2261 aa8.64□□□□□ -1.03
UBR4-216ENST00000494503 A0A087WV62 115 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 MYO1GB0I1T2 1018 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 UPK1AO00322 258 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 HS3ST1O14792 307 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 DLX3O60479 287 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 SLITRK5O94991 958 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 NUDT14O95848 222 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 THBDP07204 575 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 SBK3P0C264 359 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 CTAGE8P0CG41 777 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 IMPDH1P20839 514 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 IL32P24001 234 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 ATP5F1P24539 256 aaPredicted RBP8.63□□□□□ -1.03
UBR4-216ENST00000494503 SFTPDP35247 375 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 PKNOX1P55347 436 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 ETF1P62495 437 aaKnown RBP8.63□□□□□ -1.03
UBR4-216ENST00000494503 RPS4XP62701 263 aaKnown RBP8.63□□□□□ -1.03
UBR4-216ENST00000494503 DMTNQ08495 405 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 FAPQ12884 760 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 TNK1Q13470 666 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 CLEC12BQ2HXU8 276 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 VPS26BQ4G0F5 336 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 CFAP157Q5JU67 520 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 PDSS1Q5T2R2 415 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 HBMQ6B0K9 141 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 ANKRD26P1Q6NSI1 321 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 FIGNL1Q6PIW4 674 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 BEND4Q6ZU67 534 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 CXXC5Q7LFL8 322 aaKnown RBP8.63□□□□□ -1.03
UBR4-216ENST00000494503 ZNF551Q7Z340 670 aaPredicted RBP8.63□□□□□ -1.03
UBR4-216ENST00000494503 SLC22A9Q8IVM8 553 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 CTAGE4Q8IX94 777 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 CCDC63Q8NA47 563 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 ATP6V1C2Q8NEY4 427 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 OTUB1Q96FW1 271 aaPredicted RBP8.63□□□□□ -1.03
UBR4-216ENST00000494503 RNF145Q96MT1 663 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 AMDHD1Q96NU7 426 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 C1QTNF3Q9BXJ4 246 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 SHCBP1LQ9BZQ2 653 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 GLIPR2Q9H4G4 154 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 ZNF180Q9UJW8 692 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 GRID1Q9ULK0 1009 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 C19orf53Q9UNZ5 99 aaPredicted RBP8.63□□□□□ -1.03
UBR4-216ENST00000494503 FIS1Q9Y3D6 152 aa8.63□□□□□ -1.03
UBR4-216ENST00000494503 FREM1Q5H8C1 2179 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms