RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 NPIPA5A0A0B4J1W7 369 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 A0A1B0GVC2 190 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 GMNCA6NCL1 334 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 NPIPA7E9PJI5 369 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 FCMRO60667 390 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 SLC19A2O60779 497 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 TRAPPC6AO75865 159 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 ZIC2O95409 532 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-208ENST00000494334 ANGPTL1O95841 491 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 HPNP05981 417 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 STSP08842 583 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 NPIPA8P0DM63 369 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 DRD4P21917 467 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 TXNL4AP83876 142 aaKnown RBP12.34□□□□□ -0.43
COL1A1-208ENST00000494334 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL1A1-208ENST00000494334 FUT5Q11128 374 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 STX5Q13190 355 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 FLYWCH1Q4VC44 716 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL1A1-208ENST00000494334 ATAD3BQ5T9A4 648 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 ARHGAP11AQ6P4F7 1023 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 C16orf62Q7Z3J2 963 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 MSRB3Q8IXL7 192 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 TSPEARQ8WU66 669 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 ZNF350Q9GZX5 532 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 HOXD1Q9GZZ0 328 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 LDAHQ9H6V9 325 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 SLC25A37Q9NYZ2 338 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 PPP4R1LQ9P1A2 415 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 LEF1Q9UJU2 399 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-208ENST00000494334 POLEQ07864 2286 aa12.34□□□□□ -0.43
COL1A1-208ENST00000494334 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
COL1A1-208ENST00000494334 A0A1W2PQD3 144 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 NPIPB9F8W1W9 429 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 CLIC1O00299 241 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 SCDO00767 359 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 NDUFB5O43674 189 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 SUSD5O60279 629 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 HCN1O60741 890 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 STX11O75558 287 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 SNRPB2P08579 225 aaKnown RBP12.33□□□□□ -0.44
COL1A1-208ENST00000494334 ETFAP13804 333 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 HPGDP15428 266 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 ABOP16442 354 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 ENDOUP21128 410 aaKnown RBP12.33□□□□□ -0.44
COL1A1-208ENST00000494334 PTGS2P35354 604 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 DCTP40126 519 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 CRATP43155 626 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 MAGEA8P43361 318 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 ANXA11P50995 505 aaKnown RBP12.33□□□□□ -0.44
COL1A1-208ENST00000494334 ATP12AP54707 1039 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 C17orf67Q0P5P2 114 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 KLF10Q13118 480 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 ESPL1Q14674 2120 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 TOMM20Q15388 145 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 GPR68Q15743 365 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 EIPR1Q53HC9 387 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 AP1ARQ63HQ0 302 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 DLEU7Q6UYE1 221 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 Q6ZPB1 254 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-208ENST00000494334 SPATA21Q7Z572 469 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 RETREG3Q86VR2 466 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 OR2M3Q8NG83 312 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 NEIL3Q8TAT5 605 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 ROPN1LQ96C74 230 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 NMUR2Q9GZQ4 415 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 FAM107BQ9H098 131 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 SLC6A15Q9H2J7 730 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 DSN1Q9H410 356 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 MRGBPQ9NV56 204 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 MED11Q9P086 117 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 VAPAQ9P0L0 249 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 KCNE5Q9UJ90 142 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 MKLN1Q9UL63 735 aa12.33□□□□□ -0.44
COL1A1-208ENST00000494334 RP1L1Q8IWN7 2480 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 IGLV3-32A0A0A0MS00 114 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 TRBV5-3A0A0A0MS03 114 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 TRGV8A0A0C4DH27 118 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 NPIPA2E9PIF3 369 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 NPIPA3F8WFD2 350 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 AQP7O14520 342 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 ANGPT2O15123 496 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 SNX3O60493 162 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 SEMA7AO75326 666 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 GUSBP08236 651 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 SRD5A2P31213 254 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 RGNQ15493 299 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 CD226Q15762 336 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 SYPL1Q16563 259 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 C3AR1Q16581 482 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 GPAT3Q53EU6 434 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 WIPI1Q5MNZ9 446 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 C1QL3Q5VWW1 255 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 TYW3Q6IPR3 259 aaKnown RBP12.32□□□□□ -0.44
COL1A1-208ENST00000494334 FRRS1Q6ZNA5 592 aa12.32□□□□□ -0.44
COL1A1-208ENST00000494334 CPLX4Q7Z7G2 160 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms