RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 OR5M1Q8NGP8 315 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 PIK3R3Q92569 461 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 HOXB13Q92826 284 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 GIMAP5Q96F15 307 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 APOPT1Q96IL0 206 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 TSSK3Q96PN8 268 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 FAM111AQ96PZ2 611 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 ALPK1Q96QP1 1244 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 NPAS1Q99742 590 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 CCT7Q99832 543 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 SLC39A3Q9BRY0 314 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 REEP4Q9H6H4 257 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 EQTNQ9NQ60 294 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 MKS1Q9NXB0 559 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 TMED5Q9Y3A6 229 aa12.1□□□□□ -0.47
CTDSP1-212ENST00000494067 A0A1W2PNV4 684 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 TLDC2A0PJX2 215 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 SEC14L5O43304 696 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 HCRTR2O43614 444 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 UTS2O95399 124 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 ACP2P11117 423 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 RPL3P39023 403 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 FRKP42685 505 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 ASMTP46597 345 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 KCNJ5P48544 419 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 RPL38P63173 70 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 PDE7AQ13946 482 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 PAMR1Q6UXH9 720 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 RNF165Q6ZSG1 346 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 R3HCC1LQ7Z5L2 792 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 MARCH3Q86UD3 253 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 EXOC3L1Q86VI1 746 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 TGIF2LYQ8IUE0 185 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 DDIASQ8IXT1 998 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 FBXO30Q8TB52 745 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 SLC9A6Q92581 669 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 C1GALT1C1Q96EU7 318 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 OTUB1Q96FW1 271 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 C3orf30Q96M34 536 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 PINK1Q9BXM7 581 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 PRRG4Q9BZD6 226 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 FBXO34Q9NWN3 711 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 ZNF226Q9NYT6 803 aa12.09□□□□□ -0.47
CTDSP1-212ENST00000494067 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 A0A1W2PPR1 153 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 TMEM114B3SHH9 223 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 PIP5K1BO14986 540 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 NDUFB5O43674 189 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 TNFSF13O75888 250 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ANGPTL1O95841 491 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 NUDT17P0C025 328 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 FCGR2AP12318 317 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 MAPK1P28482 360 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 SUCLG1P53597 346 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 PRR5P85299 388 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 IFFO1Q0D2I5 559 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 GRAMD1BQ3KR37 738 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ARL13AQ5H913 290 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 EXOSC6Q5RKV6 272 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ZCCHC12Q6PEW1 402 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 NUP43Q8NFH3 380 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 AGR3Q8TD06 166 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 AENQ8WTP8 325 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 TWIST2Q8WVJ9 160 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 SMPDL3BQ92485 455 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 MBD6Q96DN6 1003 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 MTERF3Q96E29 417 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 CHMP6Q96FZ7 201 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 PGM2Q96G03 612 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ZNF764Q96H86 408 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ZNF845Q96IR2 970 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 SIRT3Q9NTG7 399 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ACSS1Q9NUB1 689 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 PAQR5Q9NXK6 330 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ELOVL5Q9NYP7 299 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 LGALS13Q9UHV8 139 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ZNF337Q9Y3M9 751 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 ZNF175Q9Y473 711 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 AP4B1Q9Y6B7 739 aa12.08□□□□□ -0.48
CTDSP1-212ENST00000494067 A0A087WZY1 265 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 OR2M5A3KFT3 312 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 EMC8O43402 210 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 GMFGO60234 142 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 TBX19O60806 448 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 HSPA4LO95757 839 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 ALOX5P09917 674 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 BCKDHAP12694 445 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 POU2F1P14859 743 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 KLK2P20151 261 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 LCN1P31025 176 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 HPCAL1P37235 193 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 SERPINB4P48594 390 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 PRIM2P49643 509 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 CLDN20P56880 219 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 OCRLQ01968 901 aa12.07□□□□□ -0.48
CTDSP1-212ENST00000494067 PON3Q15166 354 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms