RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NARSO43776 548 aaKnown RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 SEMA7AO75326 666 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ERAL1O75616 437 aaKnown RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 PCDH8O95206 1070 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 AIFM1O95831 613 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 MSL3P1P0C860 447 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 LIMS3P0CW19 117 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 LIMS4P0CW20 117 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ALPPL2P10696 532 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 SPNP16150 400 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 IL12RB1P42701 662 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 NR4A2P43354 598 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 RFX2P48378 723 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 GAS1P54826 345 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 PITPNAQ00169 270 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 TNFRSF17Q02223 184 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 CD300CQ08708 224 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ENPP2Q13822 863 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 KIR2DS3Q14952 304 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 NUMA1Q14980 2115 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 CST6Q15828 149 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 WSCD2Q2TBF2 565 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ARHGAP11BQ3KRB8 267 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 FAM78AQ5JUQ0 283 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ZNF776Q68DI1 518 aaPredicted RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 ACSM5Q6NUN0 579 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ZNF767PQ75MW2 155 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 SIX5Q8N196 739 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 MS4A15Q8N5U1 240 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 TEX19Q8NA77 164 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 LINC01555Q8NAE3 123 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ZNF485Q8NCK3 441 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 OR4D11Q8NGI4 311 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 SCARF2Q96GP6 870 aaPredicted RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 SLC41A3Q96GZ6 507 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 CD180Q99467 661 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 TRMT61BQ9BVS5 477 aaKnown RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 GTPBP2Q9BX10 602 aaKnown RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 PRDM7Q9NQW5 492 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 DUSP22Q9NRW4 184 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 STMN3Q9NZ72 180 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 POU2F3Q9UKI9 436 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 PLAGL1Q9UM63 463 aa10.74□□□□□ -0.69
RFC4-214ENST00000494047 ZNF443Q9Y2A4 671 aaPredicted RBP10.74□□□□□ -0.69
RFC4-214ENST00000494047 HEATR5BQ9P2D3 2071 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 NINQ8N4C6 2090 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 FAM240BA0A1B0GVZ2 78 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 FEZF1A0PJY2 475 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 PRR19A6NJB7 356 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 B4DXG7 233 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 FAM227AF5H4B4 570 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 NRG2O14511 850 aaPredicted RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 PRICKLE3O43900 615 aaPredicted RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 B4GALT2O60909 372 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 IFNGP01579 166 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 MT-ND5P03915 603 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 APODP05090 189 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 SERPIND1P05546 499 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 CD1AP06126 327 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 GLULP15104 373 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 ACSL1P33121 698 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 BCL6P41182 706 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 RBM34P42696 430 aaKnown RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 EVX1P49640 407 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 RAG2P55895 527 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 CLDN20P56880 219 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 STARD6P59095 220 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 KIAA1024LP59773 190 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 SKP1P63208 163 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 MRPL28Q13084 256 aaKnown RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 AGBL4Q5VU57 503 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 TANGO2Q6ICL3 276 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 ZNF425Q6IV72 752 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 MFSD12Q6NUT3 480 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 ZNF793Q6ZN11 406 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 ABHD13Q7L211 337 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 CXXC5Q7LFL8 322 aaKnown RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 C12orf40Q86WS4 652 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 NLGN4XQ8N0W4 816 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 ARIH2OSQ8N7S6 290 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 OR5D16Q8NGK9 328 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 FAM131CQ96AQ9 280 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 MSANTD3Q96H12 275 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 ST6GAL2Q96JF0 529 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 CCNL2Q96S94 520 aaPredicted RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 MCHR1Q99705 422 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 KCNJ15Q99712 375 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 KXD1Q9BQD3 176 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 MARVELD1Q9BSK0 173 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 NDC1Q9BTX1 674 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 RPP25Q9BUL9 199 aaKnown RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 MIXL1Q9H2W2 232 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 TP63Q9H3D4 680 aaPredicted RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 LYRM4Q9HD34 91 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 IMP3Q9NV31 184 aaKnown RBP10.73□□□□□ -0.69
RFC4-214ENST00000494047 HAO2Q9NYQ3 351 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 TMEM98Q9Y2Y6 226 aa10.73□□□□□ -0.69
RFC4-214ENST00000494047 WDR45Q9Y484 360 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms