RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MAN2C1Q9NTJ4 1040 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 KNL1Q8NG31 2342 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 TDRD6O60522 2096 aaKnown RBP12.86□□□□□ -0.35
VCP-207ENST00000493886 SAGE2PA6NJ88 616 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 TAF4O00268 1085 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 SYT5O00445 386 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 MBTPS2O43462 519 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 SLITRK5O94991 958 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 PPP1CAP62136 330 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 FAM214AQ32MH5 1076 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 MFSD12Q6NUT3 480 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 USP53Q70EK8 1073 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 PRSS41Q7RTY9 318 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 VRK2Q86Y07 508 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 SLC16A11Q8NCK7 471 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 OMA1Q96E52 524 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 SLCO1B1Q9Y6L6 691 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 SCN2AQ99250 2005 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 A0A1W2PPC4 97 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SH3D21A4FU49 640 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 DUXAA6NLW8 204 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ATP6V1G2-DDX39BF2Z307 99 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 TLR4O00206 839 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
VCP-207ENST00000493886 METTL11BQ5VVY1 283 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SYT13Q7L8C5 426 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 OR2L13Q8N349 312 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ZNF655Q8N720 491 aaPredicted RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 TRMT61AQ96FX7 289 aaKnown RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 TTYH1Q9H313 450 aaPredicted RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 PRDM9Q9NQV7 894 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SNTG1Q9NSN8 517 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 CLN6Q9NWW5 311 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SLC13A4Q9UKG4 626 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ISPDA4D126 451 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 AP3D1O14617 1153 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 LRRTM2O43300 516 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ZIC2O95409 532 aaPredicted RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 SRFP11831 508 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 CPMP14384 443 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 TNNI3P19429 210 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SOX6P35712 828 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 PDX1P52945 283 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 BPIFB3P59826 476 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ID2Q02363 134 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 HHEXQ03014 270 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 CDC20Q12834 499 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 TAB1Q15750 504 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 RSBN1Q5VWQ0 802 aaPredicted RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 SLX4IPQ5VYV7 408 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SHEQ5VZ18 495 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 HEPHL1Q6MZM0 1159 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ATCAYQ86WG3 371 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SIMC1Q8NDZ2 872 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 OR4K5Q8NGD3 323 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 RLN3Q8WXF3 142 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 KLHDC7BQ96G42 594 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ANKHQ9HCJ1 492 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 NDOR1Q9UHB4 597 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 OR5K3A6NET4 321 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 FCMRO60667 390 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 COPZ1P61923 177 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 DAB2P98082 770 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SMAD4Q13485 552 aaKnown RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 IRF3Q14653 427 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ZNF367Q7RTV3 350 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ZNF438Q7Z4V0 828 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ZER1Q7Z7L7 766 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 IQCHQ86VS3 1027 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SHISA5Q8N114 240 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 LINC00471Q8N535 108 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 CSNK1A1LQ8N752 337 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 MORN4Q8NDC4 146 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 GPR151Q8TDV0 419 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 SLC9A6Q92581 669 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 CDS1Q92903 461 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 TMEM203Q969S6 136 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 OPALINQ96PE5 141 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 GAS2L1Q99501 681 aaPredicted RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 TP63Q9H3D4 680 aaPredicted RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 CCDC59Q9P031 241 aaKnown RBP12.85□□□□□ -0.35
VCP-207ENST00000493886 PEX16Q9Y5Y5 336 aa12.85□□□□□ -0.35
VCP-207ENST00000493886 FRS3O43559 492 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 TP53P04637 393 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 TYRP1P17643 537 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 MMP11P24347 488 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 CASP3P42574 277 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 BLKP51451 505 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 POU6F2P78424 691 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 ZNF45Q02386 682 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 PRKCDQ05655 676 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 MANEAQ5SRI9 462 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms