RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 UCNP55089 124 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 ORC2Q13416 577 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-216ENST00000493758 UBE2V2Q15819 145 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 CDKN3Q16667 212 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 LRRC36Q1X8D7 754 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 CCDC184Q52MB2 194 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 FAM120AOSQ5T036 256 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 WSCD1Q658N2 575 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 MIER3Q7Z3K6 550 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 HSD17B13Q7Z5P4 300 aaPredicted RBP2.73□□□□□ -1.97
ITGB1-216ENST00000493758 RABEPKQ7Z6M1 372 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 OR10H4Q8NGA5 316 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 OR9A4Q8NGU2 314 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 ART4Q93070 314 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 PSMG2Q969U7 264 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 HAVCR1Q96D42 359 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 SPATA13Q96N96 652 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 EBF4Q9BQW3 602 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 CNPY3Q9BT09 278 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 TBC1D10AQ9BXI6 508 aa2.73□□□□□ -1.97
ITGB1-216ENST00000493758 RBM28Q9NW13 759 aaKnown RBP2.73□□□□□ -1.97
ITGB1-216ENST00000493758 SPAG9O60271 1321 aaKnown RBP2.72□□□□□ -1.97
ITGB1-216ENST00000493758 IGHV1OR15-1A0A075B7D0 117 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 TMEM110-MUSTN1A8MSY1 372 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 H0YL77 283 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 SCRG1O75711 98 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 MMP23AO75900 390 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 RALAP11233 206 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 IGLL1P15814 213 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 RPS2P15880 293 aaKnown RBP2.72□□□□□ -1.97
ITGB1-216ENST00000493758 FUT3P21217 361 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 RPL8P62917 257 aaKnown RBP2.72□□□□□ -1.97
ITGB1-216ENST00000493758 MECOMQ03112 1051 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 ZNF154Q13106 437 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 SULT1C3Q6IMI6 304 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 TMEM110Q86TL2 294 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 SKA3Q8IX90 412 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 RNF148Q8N7C7 305 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 MINDY2Q8NBR6 621 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 ANKRD20A12PQ8NF67 263 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 NICN1Q9BSH3 213 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 SYTL2Q9HCH5 934 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 TRPV5Q9NQA5 729 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 IL20RAQ9UHF4 553 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 CYTH4Q9UIA0 394 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 STRAPQ9Y3F4 350 aaKnown RBP2.72□□□□□ -1.97
ITGB1-216ENST00000493758 GMPPBQ9Y5P6 360 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 ANKRD30BQ9BXX2 1392 aa2.72□□□□□ -1.97
ITGB1-216ENST00000493758 SAGE2PA6NJ88 616 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 TBL1XO60907 577 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 BAG2O95816 211 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 TIMP1P01033 207 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 VLDLRP98155 873 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 BCL2L1Q07817 233 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 GAMTQ14353 236 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 Q6P435 159 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 HSD11B1LQ7Z5J1 315 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 Q8N9L7 120 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 MSANTD4Q8NCY6 345 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 SLC13A3Q8WWT9 602 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 TAF4BQ92750 862 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 NEIL2Q969S2 332 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 TADA1Q96BN2 335 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 SLC30A2Q9BRI3 323 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 ACAT2Q9BWD1 397 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 RPAP3Q9H6T3 665 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-216ENST00000493758 GPN2Q9H9Y4 310 aaPredicted RBP2.71□□□□□ -1.98
ITGB1-216ENST00000493758 POLD4Q9HCU8 107 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 MARCH5Q9NX47 278 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 OR1A1Q9P1Q5 309 aa2.71□□□□□ -1.98
ITGB1-216ENST00000493758 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.71□□□□□ -1.98
ITGB1-216ENST00000493758 LRRK1Q38SD2 2015 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 CFAP73A6NFT4 308 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 ZSCAN5BA6NJL1 495 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 BCAS2O75934 225 aaPredicted RBP2.7□□□□□ -1.98
ITGB1-216ENST00000493758 ANP32DO95626 131 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 IGHV3-48P01763 117 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 ASNSP08243 561 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 PDHBP11177 359 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 ZNF17P17021 662 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 CCNA2P20248 432 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 GABRR1P24046 479 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 CCNE1P24864 410 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 HOXD10P28358 340 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 AKT2P31751 481 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 SFNP31947 248 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 KIR2DS2P43631 304 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 HTR5AP47898 357 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 RPL29P47914 159 aaKnown RBP2.7□□□□□ -1.98
ITGB1-216ENST00000493758 MRPS11P82912 194 aaKnown RBP2.7□□□□□ -1.98
ITGB1-216ENST00000493758 CBX3Q13185 183 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 TFDP1Q14186 410 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 HERPUD1Q15011 391 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 KARSQ15046 597 aaKnown RBP2.7□□□□□ -1.98
ITGB1-216ENST00000493758 AANATQ16613 207 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 SLX4IPQ5VYV7 408 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 IGFL3Q6UXB1 125 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 MKXQ8IYA7 352 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 ENTHD1Q8IYW4 607 aa2.7□□□□□ -1.98
ITGB1-216ENST00000493758 CCNYQ8ND76 341 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms