RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SLBPQ14493 270 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SLC5A12Q1EHB4 618 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF805Q5CZA5 627 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF628Q5EBL2 1059 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF660Q6AZW8 331 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PLAG1Q6DJT9 500 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF549Q6P9A3 640 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZC3H14Q6PJT7 736 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 METAP1DQ6UB28 335 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF730Q6ZMV8 503 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PYROXD2Q8N2H3 581 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPD1LQ8N335 351 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 DMBX1Q8NFW5 382 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 OR6K3Q8NGY3 331 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 NETO1Q8TDF5 533 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPBAR1Q8TDU6 330 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PAQR8Q8TEZ7 354 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CLP1Q92989 425 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 RHBDF1Q96CC6 855 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PEBP4Q96S96 227 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 S100A13Q99584 98 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 TPT1P8Q9HAU6 139 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CD84Q9UIB8 345 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GDF2Q9UK05 429 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 MOKQ9UQ07 419 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CHST2Q9Y4C5 530 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 COL1A2P08123 1366 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 LOC285095A0A1B0GVY8 99 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 J3KR12 359 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SMAD9O15198 467 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 RGS14O43566 566 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 LSM8O95777 96 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ERCC1P07992 297 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 BDKRB2P30411 391 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 HOXA9P31269 272 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 MAGEA6P43360 314 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 KIR3DL2P43630 455 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 LUMP51884 338 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 DNAJB13P59910 316 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CAPSQ13938 189 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ATXN7L3Q14CW9 347 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GSG1Q2KHT4 349 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 RAB6CQ53S08 254 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 C3orf38Q5JPI3 329 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 FAM69AQ5T7M9 428 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 IL20RBQ6UXL0 311 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 TTLL10Q6ZVT0 673 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF687Q8N1G0 1237 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPR137CQ8N3F9 429 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SAMD12Q8N8I0 201 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZFP41Q8N8Y5 198 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPRC5AQ8NFJ5 357 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 OR6J1Q8NGC5 347 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SPPL2AQ8TCT8 520 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 THRSPQ92748 146 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 HRASLS5Q96KN8 279 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 NT5C1AQ9BXI3 368 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 RAB6CQ9H0N0 254 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 FZD8Q9H461 694 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PRDM13Q9H4Q3 707 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SARS2Q9NP81 518 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 MEPEQ9NQ76 525 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PRDM7Q9NQW5 492 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 IMP3Q9NV31 184 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 DNAJC27Q9NZQ0 273 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CHRNA9Q9UGM1 479 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 FLVCR2Q9UPI3 526 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SLC27A6Q9Y2P4 619 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 NUP214P35658 2090 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF593O00488 134 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ASGR1P07306 291 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 TMIGD3P0DMS9 266 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 UQCRC2P22695 453 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PTPN3P26045 913 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ADH6P28332 368 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 NMBRP28336 390 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CRYBB2P43320 205 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 MAGEB1P43366 347 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SLC11A2P49281 568 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CDC34P49427 236 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPR15P49685 360 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CLDN8P56748 225 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SKP1P63208 163 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SH3BP2P78314 561 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 BCL2L1Q07817 233 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 UBXN2BQ14CS0 331 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 DEFB115Q30KQ5 88 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 PKDCCQ504Y2 493 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 BEX5Q5H9J7 111 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 FBXO42Q6P3S6 717 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ALKAL1Q6UXT8 129 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM91Q6ZNR0 172 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SPATA19Q7Z5L4 167 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 VTCN1Q7Z7D3 282 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 LRRC28Q86X40 367 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 NRROSQ86YC3 692 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 MARCH9Q86YJ5 346 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 JAGN1Q8N5M9 183 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 C1orf52Q8N6N3 182 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 C15orf54Q8N8G6 183 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms