RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 DDX39BQ13838 428 aaKnown RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 GANABQ14697 944 aaKnown RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 EXOSC7Q15024 291 aaKnown RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 GALNT18Q6P9A2 607 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 FAM111BQ6SJ93 734 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 ZNF572Q7Z3I7 529 aaPredicted RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 TBC1D1Q86TI0 1168 aaPredicted RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 YRDCQ86U90 279 aaKnown RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 PLCZ1Q86YW0 608 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 KLHL7Q8IXQ5 586 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 PRR22Q8IZ63 422 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 LILRA2Q8N149 483 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 OR4K14Q8NGD5 310 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 FBXO25Q8TCJ0 367 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 PYROXD1Q8WU10 500 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 EXT2Q93063 718 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 INTS12Q96CB8 462 aaKnown RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 WFIKKN1Q96NZ8 548 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 PIGQQ9BRB3 760 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 ERP44Q9BS26 406 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 YIPF4Q9BSR8 244 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 MRPL1Q9BYD6 325 aaKnown RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 SHCBP1LQ9BZQ2 653 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 OR10A4Q9H209 315 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 EPB41L4BQ9H329 900 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 METTL7AQ9H8H3 244 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 IPPKQ9H8X2 491 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 WDR41Q9HAD4 459 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 SERHLQ9NQF3 203 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 ALKBH4Q9NXW9 302 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 ELOVL5Q9NYP7 299 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 RNF14Q9UBS8 474 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 SNX24Q9Y343 169 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 ZNF175Q9Y473 711 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 TNPO3Q9Y5L0 923 aaKnown RBP6.3□□□□□ -1.4
CAB39-206ENST00000493540 PKD1L1Q8TDX9 2849 aa6.3□□□□□ -1.4
CAB39-206ENST00000493540 A0A096LNT2 108 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 GOLGA6L10A6NI86 522 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 C17orf51A8MQB3 221 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 OVOL3O00110 214 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 ARHGEF9O43307 516 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 RAD51CO43502 376 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 FADS1O60427 444 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 TRAPPC6AO75865 159 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 CLDN9O95484 217 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 GBAP04062 536 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 HSD3B1P14060 373 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 CSNK2A2P19784 350 aaPredicted RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 IL11P20809 199 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 FPR1P21462 350 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 GRK2P25098 689 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 PSMA4P25789 261 aaKnown RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 HSD3B2P26439 372 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 MAP3K8P41279 467 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 PTH2RP49190 550 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 XKP51811 444 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 NEK2P51955 445 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 PNLIPRP2P54317 469 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 DIO3P55073 304 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 CORO7P57737 925 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 RAE1P78406 368 aaKnown RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 PSG6Q00889 435 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 FAM27E3Q08E93 113 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 SLMAPQ14BN4 828 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 LTB4RQ15722 352 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 NNATQ16517 81 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 ACKR1Q16570 336 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 PFKFB4Q16877 469 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 CTU2Q2VPK5 515 aaKnown RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 TRMT12Q53H54 448 aaKnown RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 UBAP2Q5T6F2 1119 aaKnown RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 OR2A2Q6IF42 318 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 ADAM5Q6NVV9 412 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 CYP20A1Q6UW02 462 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 C3orf62Q6ZUJ4 267 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 Q71RC1 249 aaPredicted RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 MILR1Q7Z6M3 343 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 YTHDF3Q7Z739 585 aaKnown RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 LUZP2Q86TE4 346 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 GGNQ86UU5 652 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 OR2M3Q8NG83 312 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.29□□□□□ -1.4
CAB39-206ENST00000493540 ZNF483Q8TF39 744 aaPredicted RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 TM4SF18Q96CE8 201 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 ADGRG7Q96K78 797 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 Q96MF0 132 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 COL21A1Q96P44 957 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 BDH2Q9BUT1 245 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 RTN4RQ9BZR6 473 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 TRIM31Q9BZY9 425 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 ZDHHC18Q9NUE0 388 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 SIRT5Q9NXA8 310 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 TAS2R10Q9NYW0 307 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 EHD3Q9NZN3 535 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 C6orf203Q9P0P8 240 aaPredicted RBP6.29□□□□□ -1.4
CAB39-206ENST00000493540 ABCG2Q9UNQ0 655 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 MAPRE3Q9UPY8 281 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 SAR1BQ9Y6B6 198 aa6.29□□□□□ -1.4
CAB39-206ENST00000493540 A0A087WV62 115 aa6.28□□□□□ -1.4
CAB39-206ENST00000493540 GOLGA8QA0A0J9YX86 632 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms