RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 C2CD3Q4AC94 2353 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 TACC2O95359 2948 aa10.6□□□□□ -0.71
CTSA-209ENST00000493522 HEATR5AQ86XA9 2040 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 ANKRD33BA6NCL7 494 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 LRRC3CA6NJW4 275 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 DUXAA6NLW8 204 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 NPIPA5E9PKD4 350 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 GNB5O14775 395 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 ASNA1O43681 348 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 SNX3O60493 162 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 CDC40O60508 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTSA-209ENST00000493522 CCDC22O60826 627 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 SOX30O94993 753 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 UTS2O95399 124 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 AGR2O95994 175 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 AK1P00568 194 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 SNRPB2P08579 225 aaKnown RBP10.59□□□□□ -0.71
CTSA-209ENST00000493522 ZCCHC18P0CG32 403 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 POU3F2P20265 443 aaPredicted RBP10.59□□□□□ -0.71
CTSA-209ENST00000493522 MST1P26927 711 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 PTPN6P29350 595 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 RIPPLY3P57055 190 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 PPIAP62937 165 aaKnown RBP10.59□□□□□ -0.71
CTSA-209ENST00000493522 HPCAP84074 193 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 STX5Q13190 355 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 ART3Q13508 389 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTSA-209ENST00000493522 PAGE3Q5JUK9 113 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTSA-209ENST00000493522 TMEM81Q6P7N7 255 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 ZAR1Q86SH2 424 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 DHDDSQ86SQ9 333 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 SLC22A16Q86VW1 577 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 SNX32Q86XE0 403 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 MIPOL1Q8TD10 442 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 XAGE5Q8WWM1 108 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 TBL1XR1Q9BZK7 514 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 TPT1P8Q9HAU6 139 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 PROK2Q9HC23 129 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 ZFP64Q9NPA5 681 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 FBXO34Q9NWN3 711 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 ARMCX1Q9P291 453 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 SUCOQ9UBS9 1254 aaKnown RBP10.59□□□□□ -0.71
CTSA-209ENST00000493522 NPIPA1Q9UND3 350 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 KLF2Q9Y5W3 355 aaPredicted RBP10.59□□□□□ -0.71
CTSA-209ENST00000493522 WIF1Q9Y5W5 379 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 ARHGAP21Q5T5U3 1957 aa10.59□□□□□ -0.71
CTSA-209ENST00000493522 DCHS2Q6V1P9 2916 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 NPIPA5A0A0B4J1W7 369 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 C2orf72A6NCS6 295 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 NPIPA7E9PJI5 369 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 SNPHO15079 494 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 TRIM3O75382 744 aaPredicted RBP10.58□□□□□ -0.72
CTSA-209ENST00000493522 SNX4O95219 450 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 NPIPA8P0DM63 369 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 GDF1P27539 372 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 PTGDSP41222 190 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 CRATP43155 626 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 MAGEA5P43359 124 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 CLK3P49761 638 aaKnown RBP10.58□□□□□ -0.72
CTSA-209ENST00000493522 TDGF1P3P51864 188 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 TXNL4AP83876 142 aaKnown RBP10.58□□□□□ -0.72
CTSA-209ENST00000493522 FOXO1Q12778 655 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 SNTA1Q13424 505 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 NFYCQ13952 458 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 MMEL1Q495T6 779 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 FLYWCH1Q4VC44 716 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 GPAT3Q53EU6 434 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 COX20Q5RI15 118 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 LRIF1Q5T3J3 769 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 ZNF324BQ6AW86 544 aaPredicted RBP10.58□□□□□ -0.72
CTSA-209ENST00000493522 GFRALQ6UXV0 394 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 OLIG3Q7RTU3 272 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 GDF7Q7Z4P5 450 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 SIAH3Q8IW03 269 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 FAM109AQ8N4B1 249 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 TMEM251Q8N6I4 163 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 ZNF614Q8N883 585 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 FAM110BQ8TC76 370 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 TSPEARQ8WU66 669 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 RELTQ969Z4 430 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 TMEM41AQ96HV5 264 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 RAD21L1Q9H4I0 556 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 ZNF703Q9H7S9 590 aaPredicted RBP10.58□□□□□ -0.72
CTSA-209ENST00000493522 SLC52A3Q9NQ40 469 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 PPP4R1LQ9P1A2 415 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 SEC14L3Q9UDX4 400 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 PCDHB14Q9Y5E9 798 aa10.58□□□□□ -0.72
CTSA-209ENST00000493522 F8P00451 2351 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 CLIC1O00299 241 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 HMGN4O00479 90 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 SCDO00767 359 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 MRASO14807 208 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 SLC22A2O15244 555 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 FADS1O60427 444 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 GLSO94925 669 aaPredicted RBP10.57□□□□□ -0.72
CTSA-209ENST00000493522 UNC5CO95185 931 aa10.57□□□□□ -0.72
CTSA-209ENST00000493522 OXSR1O95747 527 aaPredicted RBP10.57□□□□□ -0.72
CTSA-209ENST00000493522 ETFAP13804 333 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms