RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PRAMEF27A3QJZ7 478 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 ANKRD65E5RJM6 399 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 CXCR6O00574 342 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 TO15178 435 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 HS6ST1O60243 411 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 STX11O75558 287 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 ITGA10O75578 1167 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 CIB2O75838 187 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 H6PDO95479 791 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 CHRM4P08173 479 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 NCK1P16333 377 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 ABCD3P28288 659 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 HTR1EP28566 365 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 AQP1P29972 269 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 PIGAP37287 484 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 ST13P50502 369 aaKnown RBP12.34□□□□□ -0.43
MSH6-208ENST00000493177 SSR4P51571 173 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 MLF1P58340 268 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 KCNJ2P63252 427 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 FUT5Q11128 374 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 BNIP2Q12982 314 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 INAQ16352 499 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 INTS11Q5TA45 600 aaKnown RBP12.34□□□□□ -0.43
MSH6-208ENST00000493177 REEP3Q6NUK4 255 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 RPUSD3Q6P087 351 aaKnown RBP12.34□□□□□ -0.43
MSH6-208ENST00000493177 LRRC74BQ6ZQY2 392 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 SLC30A8Q8IWU4 369 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 TMEM156Q8N614 296 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 METTL25Q8N6Q8 603 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 FAM98AQ8NCA5 519 aaKnown RBP12.34□□□□□ -0.43
MSH6-208ENST00000493177 ST6GALNAC3Q8NDV1 305 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 CHDHQ8NE62 594 aaPredicted RBP12.34□□□□□ -0.43
MSH6-208ENST00000493177 BBS10Q8TAM1 723 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 SSC4DQ8WTU2 575 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 ASB15Q8WXK1 588 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 FAM162AQ96A26 154 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 C5orf34Q96MH7 638 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 TRNT1Q96Q11 434 aaKnown RBP12.34□□□□□ -0.43
MSH6-208ENST00000493177 RASL10BQ96S79 203 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 SDF2Q99470 211 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 G6PC3Q9BUM1 346 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 PCDHAC1Q9H158 963 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 YARS2Q9Y2Z4 477 aaKnown RBP12.34□□□□□ -0.43
MSH6-208ENST00000493177 WDR45Q9Y484 360 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 NPFFR2Q9Y5X5 522 aa12.34□□□□□ -0.43
MSH6-208ENST00000493177 NPIPA5A0A0B4J1W7 369 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 NPIPA7E9PJI5 369 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 MAN1A2O60476 641 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 PPM1BO75688 479 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 NADKO95544 446 aaPredicted RBP12.33□□□□□ -0.44
MSH6-208ENST00000493177 IL33O95760 270 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
MSH6-208ENST00000493177 NPIPA8P0DM63 369 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 EDN3P14138 238 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 CD46P15529 392 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
MSH6-208ENST00000493177 TMED10P49755 219 aaKnown RBP12.33□□□□□ -0.44
MSH6-208ENST00000493177 CHRNEQ04844 493 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 GPR68Q15743 365 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 FLYWCH1Q4VC44 716 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 LRRC23Q53EV4 343 aaPredicted RBP12.33□□□□□ -0.44
MSH6-208ENST00000493177 ZNF766Q5HY98 468 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 GLYATQ6IB77 296 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 H3F3CQ6NXT2 135 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 SLC15A4Q8N697 577 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 OR5M3Q8NGP4 307 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 DIO2Q92813 273 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 ADOQ96SZ5 270 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 KLHL1Q9NR64 748 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 FBXO34Q9NWN3 711 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 SUCOQ9UBS9 1254 aaKnown RBP12.33□□□□□ -0.44
MSH6-208ENST00000493177 MAGEL2Q9UJ55 1249 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 MKLN1Q9UL63 735 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 SNX13Q9Y5W8 968 aa12.33□□□□□ -0.44
MSH6-208ENST00000493177 HELZ2Q9BYK8 2649 aaKnown RBP12.32□□□□□ -0.44
MSH6-208ENST00000493177 A0A0G2JPF8 293 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 HNRNPCL2B2RXH8 293 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 HNRNPCL3B7ZW38 293 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 FCMRO60667 390 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 ZNF354AO60765 605 aaPredicted RBP12.32□□□□□ -0.44
MSH6-208ENST00000493177 PDE9AO76083 593 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 PGM3O95394 542 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 HNRNPCL4P0DMR1 293 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 GGT1P19440 569 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 SOX3P41225 446 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 TUBA3CQ13748 450 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 VEZF1Q14119 521 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 EFR3AQ14156 821 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 TRIM25Q14258 630 aaKnown RBP12.32□□□□□ -0.44
MSH6-208ENST00000493177 OR1C1Q15619 314 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 MAPK11Q15759 364 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 TYW3Q6IPR3 259 aaKnown RBP12.32□□□□□ -0.44
MSH6-208ENST00000493177 PGM2L1Q6PCE3 622 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 TUBA3EQ6PEY2 450 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 OPN5Q6U736 354 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 IL20RBQ6UXL0 311 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 FRRS1Q6ZNA5 592 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 HMGN2P46Q86SG4 172 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 ZAR1Q86SH2 424 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms