RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 LRRC56Q8IYG6 542 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 NAGSQ8N159 534 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 POGLUT1Q8NBL1 392 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 NLGN2Q8NFZ4 835 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 OR4F15Q8NGB8 312 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 TRMT10AQ8TBZ6 339 aaKnown RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 TRIM43Q96BQ3 446 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 LRR1Q96L50 414 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 ZNF649Q9BS31 505 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 TBC1D17Q9HA65 648 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 BEX1Q9HBH7 125 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 HRASLSQ9HDD0 168 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 NFKBIL1Q9UBC1 381 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 RASD1Q9Y272 281 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 DHRS7Q9Y394 339 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 NUP214P35658 2090 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 KCNE1BA0A087WTH5 132 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 POM121BA6NF01 834 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 CD8B2A6NJW9 211 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 TMEM200CA6NKL6 621 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 ZNF749O43361 778 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 PCDH7O60245 1069 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 GATBO75879 557 aaKnown RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 OPN1SWP03999 348 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 IGFBP1P08833 259 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 OR12D1P0DN82 309 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 CD8BP10966 210 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 ABCD3P28288 659 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 NPBWR1P48145 328 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 TTPAP49638 278 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 HCCSP53701 268 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 FABP9Q0Z7S8 132 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 C4orf46Q504U0 113 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 FBXO47Q5MNV8 452 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 OLFML2AQ68BL7 652 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 LINGO4Q6UY18 593 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 PLPPR4Q7Z2D5 763 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 MRGPREQ86SM8 312 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 CLECL1Q8IZS7 167 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 ARRDC1Q8N5I2 433 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 ZFP41Q8N8Y5 198 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 APOBEC4Q8WW27 367 aaKnown RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 OSTF1Q92882 214 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 ZNF707Q96C28 371 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 WDR89Q96FK6 387 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 FUZQ9BT04 418 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 GGACTQ9BVM4 153 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 POLR1EQ9GZS1 481 aaKnown RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS8-225ENST00000492449 STOX2Q9P2F5 926 aaPredicted RBP9.1□□□□□ -0.95
VPS8-225ENST00000492449 PATJQ8NI35 1801 aa9.1□□□□□ -0.95
VPS8-225ENST00000492449 A0A0D9SG52 128 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 TRBV4-1A0A0J9YWV2 114 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 ABHD14A-ACY1A0A1B0GW23 586 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 SLC9B1P1A6NJY1 282 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 NPIPB9F8W1W9 429 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 G3V3G9 751 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CLDN5O00501 218 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 FFAR1O14842 300 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 YY2O15391 372 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 LRATO95237 230 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CLDN9O95484 217 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CPSF4O95639 269 aaKnown RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 IFNA10P01566 189 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CBR1P16152 277 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 HTR2AP28223 471 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 RPL3P39023 403 aaKnown RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 GDNFP39905 211 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 RNF144AP50876 292 aaPredicted RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 PCBP3P57721 371 aaKnown RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 MAXP61244 160 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CDK5Q00535 292 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 ALKBH1Q13686 389 aaKnown RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 GANABQ14697 944 aaKnown RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 NOXRED1Q6NXP6 359 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 H3F3CQ6NXT2 135 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 IL20RBQ6UXL0 311 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 NHLRC1Q6VVB1 395 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 B3GLCTQ6Y288 498 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 SLC36A4Q6YBV0 504 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 UMODL1-AS1Q8N2C9 162 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 EID2Q8N6I1 236 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 RNASE11Q8TAA1 199 aaKnown RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 STK35Q8TDR2 534 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CMTM3Q96MX0 182 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 ADAT1Q9BUB4 502 aaKnown RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 TVP23BQ9NYZ1 205 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 ZNF69Q9UC07 566 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 IRAK3Q9Y616 596 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 KDM4EB2RXH2 506 aaPredicted RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 H3BN98 237 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 TMEM189-UBE2V1I3L0A0 370 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CACNB4O00305 520 aaPredicted RBP9.09□□□□□ -0.95
VPS8-225ENST00000492449 MAN2B1O00754 1011 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 KIAA0355O15063 1070 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 TLR5O60602 858 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 SOX14O95416 240 aa9.09□□□□□ -0.95
VPS8-225ENST00000492449 CD53P19397 219 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms