RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 MCIDASD6RGH6 385 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 DSCR3O14972 297 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 HCRTR1O43613 425 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 AIREO43918 545 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PRAMEF2O60811 474 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 KCNK5O95279 499 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 IFNW1P05000 195 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CDH12P55289 794 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CXADRP78310 365 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TCF15Q12870 199 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 EIF3IQ13347 325 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 LAPTM4AQ15012 233 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ARTNQ5T4W7 220 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 METTL2BQ6P1Q9 378 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 BLOC1S3Q6QNY0 202 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 P4HA3Q7Z4N8 544 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SLC22A16Q86VW1 577 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF527Q8NB42 609 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 FAM98AQ8NCA5 519 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 LSM14AQ8ND56 463 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PROKR1Q8TCW9 393 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 AP3S1Q92572 193 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CDS1Q92903 461 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 SLC47A1Q96FL8 570 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CENPNQ96H22 339 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TEX37Q96LM6 180 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 FER1L6-AS2Q96M78 137 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CHCHD6Q9BRQ6 235 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PELOQ9BRX2 385 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 TAPBPLQ9BX59 468 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PITHD1Q9GZP4 211 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 QRSL1Q9H0R6 528 aaKnown RBP4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PTGES2Q9H7Z7 377 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 LHX9Q9NQ69 397 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 RASSF1Q9NS23 344 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CLN6Q9NWW5 311 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PLA2G3Q9NZ20 509 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 CALML5Q9NZT1 146 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 PCDHA9Q9Y5H5 950 aa4.19□□□□□ -1.74
TRA2B-215ENST00000492417 NYNRINQ9P2P1 1898 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ALPK2Q86TB3 2170 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 A0A1B0GVG6 124 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 A0A1W2PPV9 198 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ISPDA4D126 451 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 FAM172BPA6NC97 362 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 A6NHS1 94 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ELOA3DA6NLF2 546 aaPredicted RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 G3V2T6 193 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CTNSO60931 367 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 UGT2B17O75795 530 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 SOX30O94993 753 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 SNX4O95219 450 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CYP4B1P13584 511 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CD59P13987 128 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CXCR1P25024 350 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 PSMA3P25788 255 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 SFTPDP35247 375 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 VBP1P61758 197 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CAMK2BQ13554 666 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ELOA3BQ3SY89 546 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 C19orf48Q6RUI8 117 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF793Q6ZN11 406 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 SH2D5Q6ZV89 423 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 RPS19BP1Q86WX3 136 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 KMT5CQ86Y97 462 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ZNF248Q8NDW4 579 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ELOA3Q8NG57 546 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ADAMTS18Q8TE60 1221 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ITPKCQ96DU7 683 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 C1GALT1C1Q96EU7 318 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 PIGUQ9H490 435 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 GLIPR2Q9H4G4 154 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 AKIRIN1Q9H9L7 192 aaPredicted RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 VAPAQ9P0L0 249 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ACAD8Q9UKU7 415 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 MRPS18BQ9Y676 258 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CDH23Q9H251 3354 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 COL4A3Q01955 1670 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 KIAA1671Q9BY89 1806 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ANKRD36A6QL64 1941 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 H3BML4 177 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 PRAMEF4O60810 478 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 MTRF1O75570 445 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 NUDT7P0C024 238 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 PSMA1P25786 263 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 GSTM2P28161 218 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 EIF2S3P41091 472 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ETV5P41161 510 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 RPP38P78345 283 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 TRA2AQ13595 282 aaKnown RBP eCLIP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 UGT8Q16880 541 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 GGTA1PQ4G0N0 100 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 PRAMEF9Q5VWM5 478 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 OGFOD3Q6PK18 319 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CA13Q8N1Q1 262 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 NATD1Q8N6N6 113 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 ASCC1Q8N9N2 400 aaKnown RBP4.18□□□□□ -1.74
TRA2B-215ENST00000492417 OR14L1PQ8NHC6 308 aa4.18□□□□□ -1.74
TRA2B-215ENST00000492417 CHTF18Q8WVB6 975 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms