RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GXYLT2A0PJZ3 443 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 SH3D21A4FU49 640 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 SLC22A20A6NK97 555 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 DEFB108AA8MXU0 73 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 H0YC42 278 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 COPEO14579 308 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 ADAMDEC1O15204 470 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 SIAH2O43255 324 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 CTIFO43310 598 aaKnown RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 RGS14O43566 566 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 NPHS1O60500 1241 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 NUDT17P0C025 328 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 CD8BP10966 210 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 BCKDHAP12694 445 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNF17P17021 662 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 HK1P19367 917 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 CD53P19397 219 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 KLK2P20151 261 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 DNASE1P24855 282 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 HOXC12P31275 282 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 PSMD4P55036 377 aaKnown RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 DIO3P55073 304 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 TPD52P55327 224 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 EEFSECP57772 596 aaKnown RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNF155Q12901 538 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 FGFBP1Q14512 234 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 ZNHIT3Q15649 155 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 DEFB113Q30KQ7 82 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 GRAMD1BQ3KR37 738 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 VPS26BQ4G0F5 336 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 XKR7Q5GH72 579 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 AP1ARQ63HQ0 302 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 MFSD12Q6NUT3 480 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 GGNQ86UU5 652 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 TRABD2AQ86V40 505 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 CXorf67Q86X51 503 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 GRAMD2AQ8IUY3 354 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 GCNT2Q8N0V5 402 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 GTPBP8Q8N3Z3 284 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 CDRT4Q8N9R6 151 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 OR4K17Q8NGC6 315 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 CEP70Q8NHQ1 597 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 FIG4Q92562 907 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 CIDECQ96AQ7 238 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 ZBED6CLQ96FA7 236 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 ADGRG7Q96K78 797 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 PIGQQ9BRB3 760 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 PTGES2Q9H7Z7 377 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 C3orf14Q9HBI5 128 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 SIRT3Q9NTG7 399 aaPredicted RBP7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 ELOVL5Q9NYP7 299 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 BAIAP2L1Q9UHR4 511 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 LGALS13Q9UHV8 139 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 PLEKHA6Q9Y2H5 1048 aa7.54□□□□□ -1.2
SMARCB1-207ENST00000491967 A0A087WZY1 265 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 A0A1W2PQD3 144 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 PDPK1O15530 556 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 SCO2O43819 266 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 KCNK2O95069 426 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 KCNH1O95259 989 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ANGPTL1O95841 491 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 CHRNGP07510 517 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 LINC00032P0C843 101 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ACP2P11117 423 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 LOXP28300 417 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ALDH3A1P30838 453 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ARRB2P32121 409 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 UGT2B10P36537 528 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 SERPINB5P36952 375 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 CD79BP40259 229 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ASMTP46597 345 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 CLK3P49761 638 aaKnown RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 CLDN20P56880 219 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 C21orf58P58505 322 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 FAM27E3Q08E93 113 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 FOXD4Q12950 439 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 HSPB3Q12988 150 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 CTU2Q2VPK5 515 aaKnown RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ARL13AQ5H913 290 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ANKRD26P1Q6NSI1 321 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 VWA1Q6PCB0 445 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 LRIG3Q6UXM1 1119 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 C22orf34Q6ZV56 151 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 ZAR1Q86SH2 424 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 LUZP2Q86TE4 346 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 EXOC3L1Q86VI1 746 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 RIMKLAQ8IXN7 391 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 C4orf33Q8N1A6 199 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 RIBC1Q8N443 379 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 MEIOBQ8N635 442 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 SLC16A11Q8NCK7 471 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 FNDC9Q8TBE3 224 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 UBLCP1Q8WVY7 318 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 IGFBPL1Q8WX77 278 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 PIK3R3Q92569 461 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 PPCDCQ96CD2 204 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 COQ8BQ96D53 544 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 PGM2Q96G03 612 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
SMARCB1-207ENST00000491967 APOPT1Q96IL0 206 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms