RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 UROSP10746 265 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 PEPDP12955 493 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 CD53P19397 219 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 NTSP30990 170 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 GPC1P35052 558 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 OPRM1P35372 400 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 MAP3K8P41279 467 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 DSCR4P56555 118 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 DNAJB13P59910 316 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 VSNL1P62760 191 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 EFR3AQ14156 821 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 PTGR1Q14914 329 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 DAZAP2Q15038 168 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 PON3Q15166 354 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 EXOC3L2Q2M3D2 409 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 ARL13AQ5H913 290 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 KANK2Q63ZY3 851 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 ENPP6Q6UWR7 440 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 P4HA3Q7Z4N8 544 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 HMGN2P46Q86SG4 172 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 ATG4DQ86TL0 474 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 DDIASQ8IXT1 998 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 KRTCAP2Q8N6L1 136 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 NUP43Q8NFH3 380 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 OR5AK3PQ8NH89 298 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 POC1BQ8TC44 478 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 TWIST2Q8WVJ9 160 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 CDS1Q92903 461 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 WNT2BQ93097 391 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 C1GALT1C1Q96EU7 318 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 PGM2Q96G03 612 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 POM121Q96HA1 1249 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 PKNOX2Q96KN3 472 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 FCRL1Q96LA6 429 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 FOXC2Q99958 501 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 LMF2Q9BU23 707 aaKnown RBP8.01□□□□□ -1.13
HDAC3-211ENST00000491581 DLL4Q9NR61 685 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 C1orf109Q9NX04 203 aa8.01□□□□□ -1.13
HDAC3-211ENST00000491581 A0A087WV62 115 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 CENPVL1A0A0U1RR11 272 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 FAM47E-STBD1D6RA91 191 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 EIF1AYO14602 144 aaKnown RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 TNFSF11O14788 317 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 ITM2AO43736 263 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 EFNA2O43921 213 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 PEX11AO75192 247 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 COQ9O75208 318 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 BCAS2O75934 225 aaPredicted RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 KCNK2O95069 426 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 SLU7O95391 586 aaKnown RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 RAF1P04049 648 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 THBDP07204 575 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 LAMP1P11279 417 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 BCKDHAP12694 445 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 CD1EP15812 388 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 CHMP24386 653 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 DNASE1P24855 282 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 EDNRAP25101 427 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 LOXP28300 417 aaPredicted RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 RPS26P62854 115 aaKnown RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 SLC18A2Q05940 514 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 KEAP1Q14145 624 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 TOMM34Q15785 309 aaPredicted RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 DECR1Q16698 335 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 TMEM44Q2T9K0 475 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 CTU2Q2VPK5 515 aaKnown RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 DEFB113Q30KQ7 82 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 DDX59Q5T1V6 619 aaKnown RBP eCLIP8□□□□□ -1.13
HDAC3-211ENST00000491581 ALKBH2Q6NS38 261 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 MFSD12Q6NUT3 480 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 AAGABQ6PD74 315 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 CBLN3Q6UW01 205 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 ZC3HAV1Q7Z2W4 902 aaKnown RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 BANPQ8N9N5 519 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 ROBO4Q8WZ75 1007 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 JADE3Q92613 823 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 PPCDCQ96CD2 204 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 PIK3IP1Q96FE7 263 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 RNF145Q96MT1 663 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 TM9SF2Q99805 663 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 SFXN3Q9BWM7 321 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 TBL1XR1Q9BZK7 514 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 SERHL2Q9H4I8 314 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 REEP4Q9H6H4 257 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 CXorf36Q9H7Y0 433 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 Q9N2J8 555 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 RRAGDQ9NQL2 400 aaPredicted RBP8□□□□□ -1.13
HDAC3-211ENST00000491581 TAS2R7Q9NYW3 318 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 ZDHHC2Q9UIJ5 367 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 PACSIN3Q9UKS6 424 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 GRID1Q9ULK0 1009 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 TESMINQ9Y4I5 508 aa8□□□□□ -1.13
HDAC3-211ENST00000491581 IGHV3-15A0A0B4J1V0 119 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 A0A0J9YW62 118 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 WDR91A4D1P6 747 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 CXCL13O43927 109 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 BCAS1O75363 584 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-211ENST00000491581 NKX2-2O95096 273 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 IL18BPO95998 194 aa7.99□□□□□ -1.13
HDAC3-211ENST00000491581 PRPS2P11908 318 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms