RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 GALNT10Q86SR1 603 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 UBQLNLQ8IYU4 475 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 GCNT2Q8N0V5 402 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 MREGQ8N565 214 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 FBXO30Q8TB52 745 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 C1GALT1C1Q96EU7 318 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 SFXN3Q9BWM7 321 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 POLDIP3Q9BY77 421 aaKnown RBP16.26■□□□□ 0.19
HMGN1-219ENST00000491183 TBL1XR1Q9BZK7 514 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 LIME1Q9H400 295 aa16.26■□□□□ 0.19
HMGN1-219ENST00000491183 F8P00451 2351 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 OR2M5A3KFT3 312 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 A6NNC1 897 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 TMEM114B3SHH9 223 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 SCAMP2O15127 329 aaKnown RBP16.25■□□□□ 0.19
HMGN1-219ENST00000491183 TNFSF13O75888 250 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 KCNK2O95069 426 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 LAMP1P11279 417 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 GANABQ14697 944 aaKnown RBP16.25■□□□□ 0.19
HMGN1-219ENST00000491183 PTGR1Q14914 329 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 DAZAP2Q15038 168 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-219ENST00000491183 TMEM44Q2T9K0 475 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 VPS26BQ4G0F5 336 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 RAET1LQ5VY80 246 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 FIGNL1Q6PIW4 674 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 SPNS3Q6ZMD2 512 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 SZRD1Q7Z422 152 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 LUZP2Q86TE4 346 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 KIF18BQ86Y91 864 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 GRAMD2AQ8IUY3 354 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 LINC01560Q8TB33 94 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 FAM120BQ96EK7 910 aaKnown RBP16.25■□□□□ 0.19
HMGN1-219ENST00000491183 OTUB1Q96FW1 271 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-219ENST00000491183 MS4A4EQ96PG1 132 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 YIPF4Q9BSR8 244 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 C1orf50Q9BV19 199 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 PARD6BQ9BYG5 372 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 PTGES2Q9H7Z7 377 aa16.25■□□□□ 0.19
HMGN1-219ENST00000491183 ZNF395Q9H8N7 513 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-219ENST00000491183 NUP214P35658 2090 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-219ENST00000491183 A0A1W2PRB8 838 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 TUBAL3A6NHL2 446 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 ALG1L2C9J202 215 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 ITM2AO43736 263 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 GMFGO60234 142 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 SKAP2O75563 359 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-219ENST00000491183 TBXA2RP21731 343 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 MAPK1P28482 360 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 HPCAL1P37235 193 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 DIO3P55073 304 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 CLDN20P56880 219 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 ZNF844Q08AG5 666 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 GLYR1Q49A26 553 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-219ENST00000491183 ATP6AP1LQ52LC2 224 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 IL23RQ5VWK5 629 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 ZCCHC12Q6PEW1 402 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 NUDCD3Q8IVD9 361 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 FIG4Q92562 907 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 PKNOX2Q96KN3 472 aa16.24■□□□□ 0.19
HMGN1-219ENST00000491183 RBM24Q9BX46 236 aaKnown RBP16.24■□□□□ 0.19
HMGN1-219ENST00000491183 CLEC4MQ9H2X3 399 aaPredicted RBP16.24■□□□□ 0.19
HMGN1-219ENST00000491183 ANKHD1Q8IWZ3 2542 aaKnown RBP16.23■□□□□ 0.19
HMGN1-219ENST00000491183 A0A1W2PNV4 684 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 A8MXE2 369 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 SHISA8B8ZZ34 492 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 H3BML4 177 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 CTIFO43310 598 aaKnown RBP16.23■□□□□ 0.19
HMGN1-219ENST00000491183 LYPLA1O75608 230 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-219ENST00000491183 OXSR1O95747 527 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-219ENST00000491183 NGFRP08138 427 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 ALOX5P09917 674 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 EPXP11678 715 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 SERPINB4P48594 390 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 IST1P53990 364 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 SORDQ00796 357 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.23■□□□□ 0.19
HMGN1-219ENST00000491183 KRT71Q3SY84 523 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 CHMP1BQ7LBR1 199 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 CDC20BQ86Y33 519 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 RIMKLAQ8IXN7 391 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 MEIOBQ8N635 442 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 KRTCAP2Q8N6L1 136 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 FNDC5Q8NAU1 212 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 GOT1L1Q8NHS2 421 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-219ENST00000491183 COQ8BQ96D53 544 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 PIGQQ9BRB3 760 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 ACBD3Q9H3P7 528 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 PIGMQ9H3S5 423 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 ZCCHC3Q9NUD5 404 aaKnown RBP16.23■□□□□ 0.19
HMGN1-219ENST00000491183 GALNT8Q9NY28 637 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 CELSR1Q9NYQ6 3014 aa16.23■□□□□ 0.19
HMGN1-219ENST00000491183 HIVEP1P15822 2718 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 WDR91A4D1P6 747 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 SLC22A20A6NK97 555 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 LINC01387J3KSC0 135 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 SEC14L5O43304 696 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 NDUFB5O43674 189 aa16.22■□□□□ 0.19
HMGN1-219ENST00000491183 ZNF500O60304 480 aaPredicted RBP16.22■□□□□ 0.19
HMGN1-219ENST00000491183 TNFRSF21O75509 655 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms