RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ERMAPQ96PL5 475 aaPredicted RBP18.12■□□□□ 0.49
SNAPC3-206ENST00000490969 ZDHHC6Q9H6R6 413 aa18.12■□□□□ 0.49
SNAPC3-206ENST00000490969 NEUROD4Q9HD90 331 aa18.12■□□□□ 0.49
SNAPC3-206ENST00000490969 PPIEQ9UNP9 301 aaKnown RBP18.12■□□□□ 0.49
SNAPC3-206ENST00000490969 CCL26Q9Y258 94 aa18.12■□□□□ 0.49
SNAPC3-206ENST00000490969 LATS1O95835 1130 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 OLFM2O95897 454 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 IFNA16P05015 189 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SDHBP21912 280 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SHC1P29353 583 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 ATP6V1E1P36543 226 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 CTSCP53634 463 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 ZP1P60852 638 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 RNASE12Q5GAN4 147 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 ZNF697Q5TEC3 545 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 OLIG3Q7RTU3 272 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SMPDL3AQ92484 453 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 C12orf66Q96MD2 445 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SLC46A2Q9BY10 475 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 REG4Q9BYZ8 158 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 ISG20L2Q9H9L3 353 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SIRT3Q9NTG7 399 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 KIF26AQ9ULI4 1882 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 A0A087WUU8 490 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SLC5A10A0PJK1 596 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 EPPINO95925 133 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 LRG1P02750 347 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 PDHA2P29803 388 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 LCN1P31025 176 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 CD70P32970 193 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 CTSOP43234 321 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 RAG2P55895 527 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SFXN4Q6P4A7 337 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 LSM14AQ8ND56 463 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 GNPDA2Q8TDQ7 276 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 YIPF5Q969M3 257 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 ZNF436Q9C0F3 470 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 SDHAF2Q9NX18 166 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 CNIH4Q9P003 139 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 MARK1Q9P0L2 795 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 HCN3Q9P1Z3 774 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 P2RX2Q9UBL9 471 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 NPTNQ9Y639 398 aa18.11■□□□□ 0.49
SNAPC3-206ENST00000490969 MTCL1Q9Y4B5 1905 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 A0A1W2PRG6 482 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 FAM170BA6NMN3 283 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 CKMP06732 381 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 ADH1AP07327 375 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 DRD2P14416 443 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 OR10A3P58181 314 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 SLC30A6Q6NXT4 461 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 KANSL1Q7Z3B3 1105 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 METTL3Q86U44 580 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 BBS1Q8NFJ9 593 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 TRMT10AQ8TBZ6 339 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 XAGE5Q8WWM1 108 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 C5AR2Q9P296 337 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 HCFC2Q9Y5Z7 792 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 SIRT4Q9Y6E7 314 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 FZD7O75084 574 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 NR2F1P10589 423 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 EPCAMP16422 314 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 UGT2B7P16662 529 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 NUP62P37198 522 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 SELENOPP49908 381 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 RNF144AP50876 292 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 NTHL1P78549 312 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 SHC2P98077 582 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 MLLT1Q03111 559 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 TUSC1Q2TAM9 212 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 PSRC1Q6PGN9 363 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 WASH2PQ6VEQ5 465 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 Q6ZNB5 142 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 FAM83HQ6ZRV2 1179 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 BTN2A1Q7KYR7 527 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 NLRC3Q7RTR2 1065 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 OR5D16Q8NGK9 328 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 SLC5A11Q8WWX8 675 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 CERS4Q9HA82 394 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 KCNK12Q9HB15 430 aa18.1■□□□□ 0.49
SNAPC3-206ENST00000490969 MFSD2BA6NFX1 497 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 ZNF593O00488 134 aaPredicted RBP18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 SURF4O15260 269 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 MTRF1O75570 445 aaKnown RBP18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 TRIM23P36406 574 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 MAPK9P45984 424 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 TSPAN31Q12999 210 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 TMEM44Q2T9K0 475 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 NXPE4Q6UWF7 544 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 RASSF6Q6ZTQ3 369 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 HSD11B1LQ7Z5J1 315 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 RASGEF1AQ8N9B8 481 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 OR6M1Q8NGM8 313 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 OR4Q3Q8NH05 313 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 ART5Q96L15 291 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 SPRTNQ9H040 489 aaPredicted RBP18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 SHARPINQ9H0F6 387 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 TMEM168Q9H0V1 697 aa18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 METTL17Q9H7H0 456 aaPredicted RBP18.09■□□□□ 0.49
SNAPC3-206ENST00000490969 DDX31Q9H8H2 851 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms