RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 EMDP50402 254 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 GTF2A1P52655 376 aaPredicted RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 ZNF136P52737 540 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 DGKQP52824 942 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 PNLIPRP2P54317 469 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 EEFSECP57772 596 aaKnown RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 BCL2A1Q16548 175 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 EIPR1Q53HC9 387 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 WIPI1Q5MNZ9 446 aaPredicted RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 BICRALQ6AI39 1079 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 OR2A2Q6IF42 318 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 ZNF551Q7Z340 670 aaPredicted RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 PLCZ1Q86YW0 608 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 TGIF2LYQ8IUE0 185 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 WDR75Q8IWA0 830 aaKnown RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 PRR22Q8IZ63 422 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 ANKS4BQ8N8V4 417 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 NAXEQ8NCW5 288 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 OR7G2Q8NG99 324 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 OR7A2PQ8NGA2 310 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 RAB3IL1Q8TBN0 382 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 PPCDCQ96CD2 204 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 SLC35A4Q96G79 324 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 AMDHD1Q96NU7 426 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 DACH2Q96NX9 599 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 MEAF6Q9HAF1 191 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 SDHAF3Q9NRP4 125 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 CCM2LQ9NUG4 571 aaPredicted RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 JKAMPQ9P055 326 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 STOML1Q9UBI4 398 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 NDRG3Q9UGV2 375 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 EIF3LQ9Y262 564 aaKnown RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 GPR55Q9Y2T6 319 aaPredicted RBP9.42□□□□□ -0.9
TTC28-207ENST00000490475 SLC6A5Q9Y345 797 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 WIF1Q9Y5W5 379 aa9.42□□□□□ -0.9
TTC28-207ENST00000490475 AKAP9Q99996 3911 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 GOLGA8QA0A0J9YX86 632 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 GOLGA8OA6NCC3 632 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 TTC36A6NLP5 189 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 GOLGA8NF8WBI6 632 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 H0YHG0 523 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 SDHDO14521 159 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 KLF11O14901 512 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 CASKO14936 926 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 HDAC3O15379 428 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 PLOD3O60568 738 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 TBX19O60806 448 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 UGT2B11O75310 529 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 RAF1P04049 648 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 LAMP1P11279 417 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 EPHA3P29320 983 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 MC3RP41968 323 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 CPA2P48052 419 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 CLK3P49761 638 aaKnown RBP9.41□□□□□ -0.9
TTC28-207ENST00000490475 PSMD4P55036 377 aaKnown RBP9.41□□□□□ -0.9
TTC28-207ENST00000490475 PDE7AQ13946 482 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 FGFBP1Q14512 234 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 GANABQ14697 944 aaKnown RBP9.41□□□□□ -0.9
TTC28-207ENST00000490475 NNATQ16517 81 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 TMEM107Q6UX40 140 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 CCDC121Q6ZUS5 278 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 LARP4Q71RC2 724 aaKnown RBP eCLIP9.41□□□□□ -0.9
TTC28-207ENST00000490475 CDC20BQ86Y33 519 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 FAM9CQ8IZT9 166 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 ELP4Q96EB1 424 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 NODALQ96S42 347 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 YIPF4Q9BSR8 244 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 TAS2R10Q9NYW0 307 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 ATP6V1HQ9UI12 483 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 DKKL1Q9UK85 242 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 CBLCQ9ULV8 474 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 OR10H1Q9Y4A9 318 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 NAV3Q8IVL0 2385 aa9.41□□□□□ -0.9
TTC28-207ENST00000490475 MED12LQ86YW9 2145 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 A0A087WV62 115 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 UPK1AO00322 258 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 ZNF195O14628 629 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 SCAMP2O15127 329 aaKnown RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 PDPK1O15530 556 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 IFI6P09912 130 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 LBPP18428 481 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 NTSP30990 170 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 MANFP55145 182 aaKnown RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 GFRA1P56159 465 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 DSCR4P56555 118 aaPredicted RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 GUCY1A3Q02108 690 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 HSPB3Q12988 150 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 MAD2L1Q13257 205 aaPredicted RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 KEAP1Q14145 624 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 ZNHIT3Q15649 155 aaPredicted RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 SMU1Q2TAY7 513 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 CYP27C1Q4G0S4 372 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 CPTPQ5TA50 214 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 DESI1Q6ICB0 168 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 POMZP3Q6PJE2 187 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 PAMR1Q6UXH9 720 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 MAVSQ7Z434 540 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 R3HCC1LQ7Z5L2 792 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms