RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CAPN3P20807 821 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 MSX1P28360 303 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 LSP1P33241 339 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 PTGS2P35354 604 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 DCTP40126 519 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 CA7P43166 264 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 RFX3P48380 749 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 ATP12AP54707 1039 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 DSCR4P56555 118 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-212ENST00000489728 PER3P56645 1201 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 RPS26P62854 115 aaKnown RBP10.1□□□□□ -0.79
CPSF7-212ENST00000489728 HPCAP84074 193 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 FADDQ13158 208 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 GNA13Q14344 377 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 MAPRE2Q15555 327 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 FLYWCH1Q4VC44 716 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 C4orf17Q53FE4 359 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 COQ5Q5HYK3 327 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 NHSL2Q5HYW2 709 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 SPATA21Q7Z572 469 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 RNF130Q86XS8 419 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 FAM26EQ8N5C1 309 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 DPP10Q8N608 796 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 OR5D16Q8NGK9 328 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 OR4C3Q8NH37 302 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 NEIL3Q8TAT5 605 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 FAM57AQ8TBR7 257 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 C10orf82Q8WW14 230 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 SARAFQ96BY9 339 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 GNRHR2Q96P88 292 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 TRNT1Q96Q11 434 aaKnown RBP10.1□□□□□ -0.79
CPSF7-212ENST00000489728 PAIP1Q9H074 479 aaKnown RBP10.1□□□□□ -0.79
CPSF7-212ENST00000489728 SAP130Q9H0E3 1048 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 DEFB127Q9H1M4 99 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 PTGES2Q9H7Z7 377 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 TPT1P8Q9HAU6 139 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 SAR1AQ9NR31 198 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 CALML5Q9NZT1 146 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 OSGIN2Q9Y236 505 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 SLC5A6Q9Y289 635 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 ESPL1Q14674 2120 aa10.1□□□□□ -0.79
CPSF7-212ENST00000489728 TENM4Q6N022 2769 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 SVILO95425 2214 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 TRBV5-3A0A0A0MS03 114 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 A0A1B0GTH9 108 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 GMNCA6NCL1 334 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 LINC01387J3KSC0 135 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 GNB5O14775 395 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ANGPT2O15123 496 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 NDUFB5O43674 189 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 SCO2O43819 266 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 KIAA0513O60268 411 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 CDC40O60508 579 aaKnown RBP eCLIP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 CCDC22O60826 627 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ANGPTL1O95841 491 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ACTL6AO96019 429 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 NPPAP01160 153 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 GSNP06396 782 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 HOXD4P09016 255 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 OR12D1P0DN82 309 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 BMP2P12643 396 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ADH7P40394 386 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 MVDP53602 400 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 SUMO3P55854 103 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ZNF141Q15928 474 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ZNF630Q2M218 657 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 EIF2S3LQ2VIR3 472 aaKnown RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 GLYR1Q49A26 553 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 KLHL26Q53HC5 615 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 CCNJQ5T5M9 372 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 PRAMEF8Q5VWM4 474 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 PRAMEF7Q5VXH5 474 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 TNFAIP8L2Q6P589 184 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 SLC2A7Q6PXP3 512 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 DNAJC14Q6Y2X3 702 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 FGD2Q7Z6J4 655 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ZAR1Q86SH2 424 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 CLEC4FQ8N1N0 589 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 METTL25Q8N6Q8 603 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 TOR1AIP2Q8NFQ8 470 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 OR2M3Q8NG83 312 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 OR4K17Q8NGC6 315 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 PRR7Q8TB68 274 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 XAGE5Q8WWM1 108 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 ROPN1LQ96C74 230 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 OTUB1Q96FW1 271 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 LDAHQ9H6V9 325 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 SLC6A13Q9NSD5 602 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 FLRT3Q9NZU0 649 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 P2RX2Q9UBL9 471 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 SUCOQ9UBS9 1254 aaKnown RBP10.09□□□□□ -0.79
CPSF7-212ENST00000489728 PRDM4Q9UKN5 801 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 NDUFAF1Q9Y375 327 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 WDR45Q9Y484 360 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 DTNAQ9Y4J8 743 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 PCDHB14Q9Y5E9 798 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 KCNE3Q9Y6H6 103 aa10.09□□□□□ -0.79
CPSF7-212ENST00000489728 NINQ8N4C6 2090 aa10.08□□□□□ -0.8
CPSF7-212ENST00000489728 A0A087WZY1 265 aa10.08□□□□□ -0.8
CPSF7-212ENST00000489728 C7orf72A4D263 438 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms