RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CNOT11Q9UKZ1 510 aaKnown RBP13.07□□□□□ -0.32
VPS26A-205ENST00000489656 ABCG2Q9UNQ0 655 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 SH3GLB1Q9Y371 365 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 CHST2Q9Y4C5 530 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 ENPP4Q9Y6X5 453 aa13.07□□□□□ -0.32
VPS26A-205ENST00000489656 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 LOC101059948A0A1B0GTJ6 334 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 TMEM200CA6NKL6 621 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 hCG_2039718K7EN88 272 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 PRKNO60260 465 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-205ENST00000489656 TSPAN2O60636 221 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 DNAJB5O75953 348 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 ZFAND5O76080 213 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 IL7RP16871 459 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 RHCEP18577 417 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 TNFRSF1BP20333 461 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 F8A1P23610 371 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 DCTP40126 519 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 OR1E2P47887 323 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 NR0B1P51843 470 aaKnown RBP13.06□□□□□ -0.32
VPS26A-205ENST00000489656 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
VPS26A-205ENST00000489656 LPCAT4Q643R3 524 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF836Q6ZNA1 936 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF605Q86T29 641 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 PACS2Q86VP3 889 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 COMTD1Q86VU5 262 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 GRAMD2AQ8IUY3 354 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 TMBIM1Q969X1 311 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 AMBRA1Q9C0C7 1298 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 KLHL4Q9C0H6 718 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 SEMA6AQ9H2E6 1030 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 KLHL28Q9NXS3 571 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 CFAP54Q96N23 3096 aa13.06□□□□□ -0.32
VPS26A-205ENST00000489656 NSG1A0A0A6YYJ2 146 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 CENPVL1A0A0U1RR11 272 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 CDHR4A6H8M9 788 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 PEX12O00623 359 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 ADAMDEC1O15204 470 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 HPP00738 406 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 NGFRP08138 427 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 NAGAP17050 411 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 ABCD3P28288 659 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 ADH7P40394 386 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 PNLIPRP2P54317 469 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 NRG3P56975 720 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 FGFBP1Q14512 234 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 BTBD16Q32M84 506 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 RAB43Q86YS6 212 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 EPHX4Q8IUS5 362 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 CMIPQ8IY22 773 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 TAGAPQ8N103 731 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 ARMC10Q8N2F6 343 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 SVOPLQ8N434 492 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 PACRGLQ8N7B6 248 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 OR4D11Q8NGI4 311 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 ADAMTS17Q8TE56 1095 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 NR4A3Q92570 626 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 EME1Q96AY2 570 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 NRBF2Q96F24 287 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 IP6K3Q96PC2 410 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 LMF1Q96S06 567 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 C9orf16Q9BUW7 83 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 ARMC7Q9H6L4 198 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 SLC13A4Q9UKG4 626 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 ACAD8Q9UKU7 415 aa13.05□□□□□ -0.32
VPS26A-205ENST00000489656 NPIPA5A0A0B4J1W7 369 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 OR6C70A6NIJ9 312 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 NPIPA7E9PJI5 369 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 H0YJX3 145 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 GNGT2O14610 69 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 NADKO95544 446 aaPredicted RBP13.04□□□□□ -0.32
VPS26A-205ENST00000489656 NPIPA8P0DM63 369 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 LIPCP11150 499 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 ICAM2P13598 275 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 ZNF26P17031 533 aaPredicted RBP13.04□□□□□ -0.32
VPS26A-205ENST00000489656 TBXA2RP21731 343 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 OTX2P32243 289 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 PLCXD2Q0VAA5 305 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 GRAMD1BQ3KR37 738 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 PDZK1Q5T2W1 519 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 MRPL2Q5T653 305 aaKnown RBP13.04□□□□□ -0.32
VPS26A-205ENST00000489656 PPP4R4Q6NUP7 873 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 TCTN3Q6NUS6 607 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 HMGN2P46Q86SG4 172 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 CYP4Z1Q86W10 505 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 LACC1Q8IV20 430 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 KBTBD2Q8IY47 623 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 CLIP4Q8N3C7 705 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 SLC15A4Q8N697 577 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 ICA1LQ8NDH6 482 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 OR5K1Q8NHB7 308 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 PHF10Q8WUB8 498 aaKnown RBP13.04□□□□□ -0.32
VPS26A-205ENST00000489656 EFHD2Q96C19 240 aaPredicted RBP13.04□□□□□ -0.32
VPS26A-205ENST00000489656 OMA1Q96E52 524 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 DHRS1Q96LJ7 313 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 EPYCQ99645 322 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 PIP5K1AQ99755 562 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
VPS26A-205ENST00000489656 DEFB126Q9BYW3 111 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms