RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 LRRC42Q9Y546 428 aa20■□□□□ 0.79
SMC4-221ENST00000489573 IGHV1-45A0A0A0MS14 117 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 TRBV11-1A0A0K0K1C0 115 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 NPIPB9F8W1W9 429 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 EI24O14681 340 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 RAD1O60671 282 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 RPS15P62841 145 aaKnown RBP19.99■□□□□ 0.79
SMC4-221ENST00000489573 ZNF141Q15928 474 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 SHQ1Q6PI26 577 aaKnown RBP19.99■□□□□ 0.79
SMC4-221ENST00000489573 STK32CQ86UX6 486 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 MARCH9Q86YJ5 346 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 OR6T1Q8NGN1 323 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 OR8K3Q8NH51 312 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 NUBPLQ8TB37 319 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 ADAMTS14Q8WXS8 1223 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 EFHD2Q96C19 240 aaPredicted RBP19.99■□□□□ 0.79
SMC4-221ENST00000489573 EPYCQ99645 322 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 ARMC7Q9H6L4 198 aa19.99■□□□□ 0.79
SMC4-221ENST00000489573 CLDN24A6NM45 220 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 H0YJX3 145 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 COX6A1P12074 109 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 STAT5AP42229 794 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 ARHGDIAP52565 204 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 ATP12AP54707 1039 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 DNASE1L3Q13609 305 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 OTUD3Q5T2D3 398 aaPredicted RBP19.98■□□□□ 0.79
SMC4-221ENST00000489573 PDZK1Q5T2W1 519 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 TCTN3Q6NUS6 607 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 TBPL2Q6SJ96 375 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 SLC34A3Q8N130 599 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 GALNT15Q8N3T1 639 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 AMER2Q8N7J2 671 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 TP53INP1Q96A56 240 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 NRBF2Q96F24 287 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 RLIMQ9NVW2 624 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 KCND3Q9UK17 655 aa19.98■□□□□ 0.79
SMC4-221ENST00000489573 CDC14CA4D256 554 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 C21orf140B9A014 251 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 STMND1H3BQB6 276 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 TNFRSF11BO00300 401 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 KRT20P35900 424 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 CDH12P55289 794 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 RGS8P57771 180 aaPredicted RBP19.97■□□□□ 0.79
SMC4-221ENST00000489573 RPS18P62269 152 aaKnown RBP19.97■□□□□ 0.79
SMC4-221ENST00000489573 PLCXD2Q0VAA5 305 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 MRPL2Q5T653 305 aaKnown RBP19.97■□□□□ 0.79
SMC4-221ENST00000489573 HS3ST5Q8IZT8 346 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 ZNF614Q8N883 585 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 OIT3Q8WWZ8 545 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 DIO2Q92813 273 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 ZNF597Q96LX8 424 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 HOXD1Q9GZZ0 328 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 MAGED1Q9Y5V3 778 aaPredicted RBP19.97■□□□□ 0.79
SMC4-221ENST00000489573 LYVE1Q9Y5Y7 322 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 SDK2Q58EX2 2172 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 DCHS1Q96JQ0 3298 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 RIF1Q5UIP0 2472 aaKnown RBP19.97■□□□□ 0.79
SMC4-221ENST00000489573 KNTC1P50748 2209 aa19.97■□□□□ 0.79
SMC4-221ENST00000489573 A0A1W2PQ72 361 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 SOCS6O14544 535 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 FRS3O43559 492 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 SEMA7AO75326 666 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 RBMS1P29558 406 aaKnown RBP19.96■□□□□ 0.79
SMC4-221ENST00000489573 LCN1P31025 176 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 HSPA13P48723 471 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 DAG1Q14118 895 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 GK3PQ14409 553 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 GANABQ14697 944 aaKnown RBP19.96■□□□□ 0.79
SMC4-221ENST00000489573 TAF11Q15544 211 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 NPTX1Q15818 432 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 KIRREL2Q6UWL6 708 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 PRR22Q8IZ63 422 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 OR5L2Q8NGL0 311 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 PRRC1Q96M27 445 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 GPR87Q9BY21 358 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 FAM117AQ9C073 453 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 GABARAPL1Q9H0R8 117 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 EVA1AQ9H8M9 152 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.96■□□□□ 0.79
SMC4-221ENST00000489573 ACAD8Q9UKU7 415 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 CDV3Q9UKY7 258 aaKnown RBP19.96■□□□□ 0.79
SMC4-221ENST00000489573 DMXL1Q9Y485 3027 aa19.96■□□□□ 0.79
SMC4-221ENST00000489573 CDHR4A6H8M9 788 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 FFAR1O14842 300 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 REM1O75628 298 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 ZFAND5O76080 213 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 CD82P27701 267 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 IL12BP29460 328 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 DLSTP36957 453 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 ALDH3A2P51648 485 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 SSPNQ14714 243 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 EXT1Q16394 746 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 ZSWIM7Q19AV6 140 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 BTBD16Q32M84 506 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 TMPRSS7Q7RTY8 843 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 OR11G2Q8NGC1 345 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 OR4C15Q8NGM1 316 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 OMA1Q96E52 524 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 USE1Q9NZ43 259 aa19.95■□□□□ 0.78
SMC4-221ENST00000489573 PTPRZ1P23471 2315 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms