RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 C9JVG2 144 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 ANGPTL1O95841 491 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 AGR2O95994 175 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 ACTL6AO96019 429 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 AK1P00568 194 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 GP1BBP13224 206 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 ACVR2AP27037 513 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 DPP4P27487 766 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 PTGER4P35408 488 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 POLR2JP52435 117 aaKnown RBP15.78■□□□□ 0.12
MDC1-206ENST00000489540 DSCR4P56555 118 aaPredicted RBP15.78■□□□□ 0.12
MDC1-206ENST00000489540 ADORA2A-AS1P86434 159 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 DCST2Q5T1A1 773 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 CCNJQ5T5M9 372 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 MSANTD1Q6ZTZ1 278 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 MAMDC2Q7Z304 686 aaPredicted RBP15.78■□□□□ 0.12
MDC1-206ENST00000489540 PM20D2Q8IYS1 436 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 CLEC4FQ8N1N0 589 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 FADS6Q8N9I5 356 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 ABTB1Q969K4 478 aaPredicted RBP15.78■□□□□ 0.12
MDC1-206ENST00000489540 NEURL3Q96EH8 262 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 SLC35G5Q96KT7 338 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 TIMP4Q99727 224 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 EBF4Q9BQW3 602 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 SIKE1Q9BRV8 207 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 DSN1Q9H410 356 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 EXD2Q9NVH0 621 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 FBXO34Q9NWN3 711 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 ALKBH4Q9NXW9 302 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 TNFRSF10DQ9UBN6 386 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 PLEKHB1Q9UF11 243 aaPredicted RBP15.78■□□□□ 0.12
MDC1-206ENST00000489540 SLC6A5Q9Y345 797 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 KCNE3Q9Y6H6 103 aa15.78■□□□□ 0.12
MDC1-206ENST00000489540 EML6Q6ZMW3 1958 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 FAM234BA2RU67 622 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 AHRRA9YTQ3 701 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 SCDO00767 359 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 NDUFB5O43674 189 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 EDF1O60869 148 aaKnown RBP15.77■□□□□ 0.12
MDC1-206ENST00000489540 OXSR1O95747 527 aaPredicted RBP15.77■□□□□ 0.12
MDC1-206ENST00000489540 BMP7P18075 431 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 CHI3L1P36222 383 aaPredicted RBP15.77■□□□□ 0.12
MDC1-206ENST00000489540 CRYZQ08257 329 aaKnown RBP15.77■□□□□ 0.12
MDC1-206ENST00000489540 STX5Q13190 355 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 SF3B4Q15427 424 aaKnown RBP eCLIP15.77■□□□□ 0.12
MDC1-206ENST00000489540 SAXO2Q658L1 398 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 APOOLQ6UXV4 268 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 ZNF621Q6ZSS3 439 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 ZAR1Q86SH2 424 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 GALNT10Q86SR1 603 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 MISPQ8IVT2 679 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 ZNF527Q8NB42 609 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 OR2M3Q8NG83 312 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 SLC35A5Q9BS91 424 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 RTN4RQ9BZR6 473 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 RMND5AQ9H871 391 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 TMEM45AQ9NWC5 275 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 MED11Q9P086 117 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 DKKL1Q9UK85 242 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 FLNBO75369 2602 aaKnown RBP15.77■□□□□ 0.12
MDC1-206ENST00000489540 DOPEY2Q9Y3R5 2298 aa15.77■□□□□ 0.12
MDC1-206ENST00000489540 DOPEY1Q5JWR5 2465 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 IGLV3-32A0A0A0MS00 114 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 A0A1W2PQD3 144 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 A1L4Q6 167 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 RFXANKO14593 260 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 ZIC3O60481 467 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 MSX1P28360 303 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 RPS26P62854 115 aaKnown RBP15.77■□□□□ 0.11
MDC1-206ENST00000489540 TXNL4AP83876 142 aaKnown RBP15.77■□□□□ 0.11
MDC1-206ENST00000489540 ART3Q13508 389 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 GANABQ14697 944 aaKnown RBP15.77■□□□□ 0.11
MDC1-206ENST00000489540 ATAD3BQ5T9A4 648 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 AAGABQ6PD74 315 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 B3GNT6Q6ZMB0 384 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 IFNEQ86WN2 208 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 CHDHQ8NE62 594 aaPredicted RBP15.77■□□□□ 0.11
MDC1-206ENST00000489540 OR5D16Q8NGK9 328 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 RND1Q92730 232 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 SDF2Q99470 211 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 INPP5KQ9BT40 448 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 UGT2B28Q9BY64 529 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 OR51I1Q9H343 314 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 SERHL2Q9H4I8 314 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 COQ3Q9NZJ6 369 aa15.77■□□□□ 0.11
MDC1-206ENST00000489540 CLDN1O95832 211 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 ANXA11P50995 505 aaKnown RBP15.76■□□□□ 0.11
MDC1-206ENST00000489540 ATP12AP54707 1039 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 PMPCAQ10713 525 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 ARHGAP11BQ3KRB8 267 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 GLYR1Q49A26 553 aaPredicted RBP15.76■□□□□ 0.11
MDC1-206ENST00000489540 FLYWCH1Q4VC44 716 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 C1orf185Q5T7R7 199 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 MYO7BQ6PIF6 2116 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 ENPP6Q6UWR7 440 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 ULK2Q8IYT8 1036 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 ITCHQ96J02 903 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 PRDM14Q9GZV8 571 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 ZNF407Q9C0G0 2248 aa15.76■□□□□ 0.11
MDC1-206ENST00000489540 USP9YO00507 2555 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms