RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 MAP3K8P41279 467 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 PSMD4P55036 377 aaKnown RBP12.68□□□□□ -0.38
VTI1A-206ENST00000489142 MPP2Q14168 576 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 SF3B4Q15427 424 aaKnown RBP eCLIP12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CPTPQ5TA50 214 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 GRAMD2AQ8IUY3 354 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CDRT4Q8N9R6 151 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 OR4C3Q8NH37 302 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CEP70Q8NHQ1 597 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CDS1Q92903 461 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 INTS12Q96CB8 462 aaKnown RBP12.68□□□□□ -0.38
VTI1A-206ENST00000489142 MTERF3Q96E29 417 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 KCNK9Q9NPC2 374 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 SDHAF3Q9NRP4 125 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 ZCCHC3Q9NUD5 404 aaKnown RBP12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CRIM1Q9NZV1 1036 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CLCF1Q9UBD9 225 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CELSR1Q9NYQ6 3014 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CCDC168Q8NDH2 2452 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 HRNRQ86YZ3 2850 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 KCNK2O95069 426 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 OXSR1O95747 527 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 TGM6O95932 706 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 SERPINE1P05121 402 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 HMGN2P05204 90 aaKnown RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 IFI6P09912 130 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 ALOX5P09917 674 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 G6PDP11413 515 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 CHMP24386 653 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 KIR2DL3P43628 341 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 CLK3P49761 638 aaKnown RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 SUCLG1P53597 346 aaKnown RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 ABCE1P61221 599 aaKnown RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 TP53BP2Q13625 1128 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 LASP1Q14847 261 aaKnown RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 VPS26BQ4G0F5 336 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 LRIG3Q6UXM1 1119 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 ADGRE4PQ86SQ3 457 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 LUZP2Q86TE4 346 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 COX18Q8N8Q8 333 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 OR5AK3PQ8NH89 298 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 RNASE6Q93091 150 aaKnown RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 C1GALT1C1Q96EU7 318 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 NPAS1Q99742 590 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 KLHDC3Q9BQ90 382 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 CXorf36Q9H7Y0 433 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 NTMQ9P121 344 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 ZNF629Q9UEG4 869 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 VDAC3Q9Y277 283 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 MRPS18CQ9Y3D5 142 aaKnown RBP12.67□□□□□ -0.38
VTI1A-206ENST00000489142 ZNF337Q9Y3M9 751 aa12.67□□□□□ -0.38
VTI1A-206ENST00000489142 MPDZO75970 2070 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 NPIPA5A0A0B4J1W7 369 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 OR2M5A3KFT3 312 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 TTC36A6NLP5 189 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 NPIPA7E9PJI5 369 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 SYT5O00445 386 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 CFLARO15519 480 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 DHRS4L1P0CG22 281 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 NPIPA8P0DM63 369 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 OPRM1P35372 400 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 SLC1A6P48664 564 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 CLDN15P56746 228 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 CLDN20P56880 219 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 PRR5P85299 388 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 PGS1Q32NB8 556 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 SPDYE7PQ495Y7 208 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 CLEC4FQ8N1N0 589 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 ANKRD42Q8N9B4 389 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 DTNBP1Q96EV8 351 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 SH3YL1Q96HL8 342 aaPredicted RBP12.66□□□□□ -0.38
VTI1A-206ENST00000489142 SORT1Q99523 831 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 TM9SF2Q99805 663 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
VTI1A-206ENST00000489142 GPATCH1Q9BRR8 931 aaKnown RBP12.66□□□□□ -0.38
VTI1A-206ENST00000489142 PTGES2Q9H7Z7 377 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 GIN1Q9NXP7 522 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 EIF3LQ9Y262 564 aaKnown RBP12.66□□□□□ -0.38
VTI1A-206ENST00000489142 KCNE3Q9Y6H6 103 aa12.66□□□□□ -0.38
VTI1A-206ENST00000489142 ANKHD1Q8IWZ3 2542 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 TM9SF1O15321 606 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 BIRC5O15392 142 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 NDUFB5O43674 189 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 RCBTB2O95199 551 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 OPN1LWP04000 364 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 CAPN3P20807 821 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 SOAT1P35610 550 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 RPL3P39023 403 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 CCT3P49368 545 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 PRIM2P49643 509 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 DIO3P55073 304 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 RPS26P62854 115 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 POU6F2P78424 691 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 GANABQ14697 944 aaKnown RBP12.65□□□□□ -0.38
VTI1A-206ENST00000489142 MLC1Q15049 377 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 CD226Q15762 336 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 FBXL19-AS1Q494R0 122 aa12.65□□□□□ -0.38
VTI1A-206ENST00000489142 FLYWCH1Q4VC44 716 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms