RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 EEF1A1P68104 462 aaKnown RBP11.34□□□□□ -0.59
SRRM1-216ENST00000489130 ZNF844Q08AG5 666 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 PTGR1Q14914 329 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 DUSP5Q16690 384 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 GLYR1Q49A26 553 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-216ENST00000489130 C6orf136Q5SQH8 315 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 EEF1A1P5Q5VTE0 462 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 GRAMD2AQ8IUY3 354 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 GCNT2Q8N0V5 402 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 SLC16A11Q8NCK7 471 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 PSMA8Q8TAA3 256 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 FBXO30Q8TB52 745 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 FAM110BQ8TC76 370 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 SLC9A6Q92581 669 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 INTS12Q96CB8 462 aaKnown RBP11.34□□□□□ -0.59
SRRM1-216ENST00000489130 PIGQQ9BRB3 760 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 GPATCH1Q9BRR8 931 aaKnown RBP11.34□□□□□ -0.59
SRRM1-216ENST00000489130 HHATLQ9HCP6 504 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 RASSF1Q9NS23 344 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
SRRM1-216ENST00000489130 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.34□□□□□ -0.59
SRRM1-216ENST00000489130 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-216ENST00000489130 MED12Q93074 2177 aa11.34□□□□□ -0.59
SRRM1-216ENST00000489130 CCDC168Q8NDH2 2452 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 OR2M5A3KFT3 312 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 TUBAL3A6NHL2 446 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 SLC22A20A6NK97 555 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 SKAP2O75563 359 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 TNFSF13O75888 250 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 OXSR1O95747 527 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 CRHP06850 196 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 LAMP1P11279 417 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 EFNA1P20827 205 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 TBXA2RP21731 343 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 LCN1P31025 176 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 DNAJA1P31689 397 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 SERPINB4P48594 390 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 PRIM2P49643 509 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 DIO3P55073 304 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 EEFSECP57772 596 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 OCRLQ01968 901 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 DAZAP2Q15038 168 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 TMEM44Q2T9K0 475 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 KRT71Q3SY84 523 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 IL23RQ5VWK5 629 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 GALNT10Q86SR1 603 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 UBQLNLQ8IYU4 475 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 MEIOBQ8N635 442 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 NATD1Q8N6N6 113 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 FNDC5Q8NAU1 212 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 OR7A2PQ8NGA2 310 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 OR4C3Q8NH37 302 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 NRGNQ92686 78 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 C16orf58Q96GQ5 468 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 PKNOX2Q96KN3 472 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 STACQ99469 402 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 C1orf50Q9BV19 199 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 RBM24Q9BX46 236 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 POLDIP3Q9BY77 421 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 PARD6BQ9BYG5 372 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 CLEC4MQ9H2X3 399 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 PIGMQ9H3S5 423 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 DUSP22Q9NRW4 184 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 ZCCHC3Q9NUD5 404 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 ATAD3AQ9NVI7 634 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 GIN1Q9NXP7 522 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 GALNT8Q9NY28 637 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 PACSIN3Q9UKS6 424 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 ZNF337Q9Y3M9 751 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 AP4B1Q9Y6B7 739 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 DOCK7Q96N67 2140 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 ANKHD1Q8IWZ3 2542 aaKnown RBP11.33□□□□□ -0.6
SRRM1-216ENST00000489130 CELSR1Q9NYQ6 3014 aa11.33□□□□□ -0.6
SRRM1-216ENST00000489130 A0A1W2PNV4 684 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 A0A1W2PRB8 838 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 A8MXE2 369 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 H0YC42 278 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 H3BML4 177 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
SRRM1-216ENST00000489130 CTIFO43310 598 aaKnown RBP11.32□□□□□ -0.6
SRRM1-216ENST00000489130 NDUFB5O43674 189 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 TNFRSF21O75509 655 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 GOSR1O95249 250 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 HSPA4LO95757 839 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 HMGN2P05204 90 aaKnown RBP11.32□□□□□ -0.6
SRRM1-216ENST00000489130 ALOX5P09917 674 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 EPXP11678 715 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 ZNF17P17021 662 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 PRPS1L1P21108 318 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 SUCLG1P53597 346 aaKnown RBP11.32□□□□□ -0.6
SRRM1-216ENST00000489130 TPD52P55327 224 aaPredicted RBP11.32□□□□□ -0.6
SRRM1-216ENST00000489130 C21orf58P58505 322 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 LASP1Q14847 261 aaKnown RBP11.32□□□□□ -0.6
SRRM1-216ENST00000489130 CPTPQ5TA50 214 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 FIGNL1Q6PIW4 674 aa11.32□□□□□ -0.6
SRRM1-216ENST00000489130 CHMP1BQ7LBR1 199 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms