RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SDHAF3Q9NRP4 125 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 FBXO34Q9NWN3 711 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 ASIC5Q9NY37 505 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 HAO1Q9UJM8 370 aa22.64■■□□□ 1.21
HMGN1-217ENST00000489072 EIF3LQ9Y262 564 aaKnown RBP22.64■■□□□ 1.21
HMGN1-217ENST00000489072 H0Y3Z8 333 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 DVL2O14641 736 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 KCNK2O95069 426 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 C6orf47O95873 294 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 HMGN2P05204 90 aaKnown RBP22.63■■□□□ 1.21
HMGN1-217ENST00000489072 MYZAPP0CAP1 466 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 ZNF708P17019 499 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 CHMP24386 653 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 RPL14P50914 215 aaKnown RBP22.63■■□□□ 1.21
HMGN1-217ENST00000489072 DIO3P55073 304 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 C21orf58P58505 322 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 PRR5P85299 388 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 AAGABQ6PD74 315 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 ZCCHC12Q6PEW1 402 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 FIGNL1Q6PIW4 674 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 ANKRD42Q8N9B4 389 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 OR4C3Q8NH37 302 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 TBL1XR1Q9BZK7 514 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 ATAD3AQ9NVI7 634 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 SNX8Q9Y5X2 465 aa22.63■■□□□ 1.21
HMGN1-217ENST00000489072 ANGPTL1O95841 491 aa22.62■■□□□ 1.21
HMGN1-217ENST00000489072 ALOX5P09917 674 aa22.62■■□□□ 1.21
HMGN1-217ENST00000489072 HK1P19367 917 aa22.62■■□□□ 1.21
HMGN1-217ENST00000489072 CLK3P49761 638 aaKnown RBP22.62■■□□□ 1.21
HMGN1-217ENST00000489072 CLDN8P56748 225 aa22.62■■□□□ 1.21
HMGN1-217ENST00000489072 MAD2L1Q13257 205 aaPredicted RBP22.62■■□□□ 1.21
HMGN1-217ENST00000489072 STX3Q13277 289 aa22.62■■□□□ 1.21
HMGN1-217ENST00000489072 LASP1Q14847 261 aaKnown RBP22.62■■□□□ 1.21
HMGN1-217ENST00000489072 SMU1Q2TAY7 513 aa22.62■■□□□ 1.21
HMGN1-217ENST00000489072 JADE3Q92613 823 aa22.62■■□□□ 1.21
HMGN1-217ENST00000489072 PAIP2Q9BPZ3 127 aaKnown RBP22.62■■□□□ 1.21
HMGN1-217ENST00000489072 BHLHE41Q9C0J9 482 aaPredicted RBP22.62■■□□□ 1.21
HMGN1-217ENST00000489072 NOP53Q9NZM5 478 aaKnown RBP22.62■■□□□ 1.21
HMGN1-217ENST00000489072 ZNF629Q9UEG4 869 aaPredicted RBP22.62■■□□□ 1.21
HMGN1-217ENST00000489072 IGLV3-32A0A0A0MS00 114 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 CLCA1A8K7I4 914 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 SNUPNO95149 360 aaKnown RBP22.61■■□□□ 1.21
HMGN1-217ENST00000489072 OXSR1O95747 527 aaPredicted RBP22.61■■□□□ 1.21
HMGN1-217ENST00000489072 CCT3P49368 545 aaKnown RBP22.61■■□□□ 1.21
HMGN1-217ENST00000489072 PRIM2P49643 509 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 AGFG1P52594 562 aaKnown RBP22.61■■□□□ 1.21
HMGN1-217ENST00000489072 WDR4P57081 412 aaKnown RBP22.61■■□□□ 1.21
HMGN1-217ENST00000489072 BST1Q10588 318 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.61■■□□□ 1.21
HMGN1-217ENST00000489072 CCNJQ5T5M9 372 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 NATD1Q8N6N6 113 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 COX18Q8N8Q8 333 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 C1GALT1C1Q96EU7 318 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 UCN2Q96RP3 112 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 PRPF18Q99633 342 aaKnown RBP22.61■■□□□ 1.21
HMGN1-217ENST00000489072 SH3GL2Q99962 352 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 DUSP26Q9BV47 211 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 MCCC2Q9HCC0 563 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 PNPOQ9NVS9 261 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 CLCF1Q9UBD9 225 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 L3MBTL1Q9Y468 752 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 AKAP9Q99996 3911 aa22.61■■□□□ 1.21
HMGN1-217ENST00000489072 ALG1L2C9J202 215 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 NGFRP08138 427 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 CTSSP25774 331 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 ASCL1P50553 236 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 C17orf67Q0P5P2 114 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 SNTB1Q13884 538 aaKnown RBP22.6■■□□□ 1.21
HMGN1-217ENST00000489072 GANABQ14697 944 aaKnown RBP22.6■■□□□ 1.21
HMGN1-217ENST00000489072 LSM12Q3MHD2 195 aaKnown RBP22.6■■□□□ 1.21
HMGN1-217ENST00000489072 BEND6Q5SZJ8 279 aaPredicted RBP22.6■■□□□ 1.21
HMGN1-217ENST00000489072 HHATQ5VTY9 493 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 RAET1LQ5VY80 246 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 CAMKMTQ7Z624 323 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 OR5M1Q8NGP8 315 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 CDS1Q92903 461 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 NUF2Q9BZD4 464 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 PTGES2Q9H7Z7 377 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 GPATCH2Q9NW75 528 aa22.6■■□□□ 1.21
HMGN1-217ENST00000489072 TMEM120BA0PK00 339 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 SYT5O00445 386 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 GMFGO60234 142 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 TBXA2RP21731 343 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 POU6F2P78424 691 aaPredicted RBP22.59■■□□□ 1.21
HMGN1-217ENST00000489072 FOXF2Q12947 444 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 TP53BP2Q13625 1128 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 BCL2A1Q16548 175 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 PGS1Q32NB8 556 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 CDC73Q6P1J9 531 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 OR56A1Q8NGH5 318 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 STACQ99469 402 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 BTBD2Q9BX70 525 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 PIGUQ9H490 435 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 DUSP22Q9NRW4 184 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 KCNN3Q9UGI6 736 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 ZNF337Q9Y3M9 751 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 MPDZO75970 2070 aa22.59■■□□□ 1.21
HMGN1-217ENST00000489072 OR2M5A3KFT3 312 aa22.58■■□□□ 1.21
HMGN1-217ENST00000489072 TMIGD3P0DMS9 266 aaPredicted RBP22.58■■□□□ 1.21
HMGN1-217ENST00000489072 DGKQP52824 942 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms