RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SGCBQ16585 318 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 FIGNL1Q6PIW4 674 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 ZYG11AQ6WRX3 759 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 OR2L13Q8N349 312 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 LRRN4CLQ8ND94 238 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 GPR151Q8TDV0 419 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 NUDT8Q8WV74 236 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 C16orf58Q96GQ5 468 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 SH3YL1Q96HL8 342 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 TBL1XR1Q9BZK7 514 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 STMN4Q9H169 189 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 RNF122Q9H9V4 155 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 MYNNQ9NPC7 610 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 SDHAF3Q9NRP4 125 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 SIRT5Q9NXA8 310 aa14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 PSMC3IPQ9P2W1 217 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-217ENST00000488935 CSPG4Q6UVK1 2322 aa14.27□□□□□ -0.12
ERGIC3-217ENST00000488935 C16orf97H3BN30 126 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 TNFRSF21O75509 655 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 THBDP07204 575 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 GSTA1P08263 222 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 ACP2P11117 423 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 CRYGSP22914 178 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 PCSK6P29122 969 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 GPC1P35052 558 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 ACKR1Q16570 336 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 OR2A2Q6IF42 318 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 TRMT10CQ7L0Y3 403 aaKnown RBP14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 GGNQ86UU5 652 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 LSRQ86X29 649 aaPredicted RBP14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 MNS1Q8NEH6 495 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 OR2T11Q8NH01 316 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 OR4C3Q8NH37 302 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 MARK4Q96L34 752 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 CCL19Q99731 98 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 LMF2Q9BU23 707 aaKnown RBP14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 PTGES2Q9H7Z7 377 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 FAM120CQ9NX05 1096 aaKnown RBP14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 GIMAP2Q9UG22 337 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 PROCRQ9UNN8 238 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 CCL27Q9Y4X3 112 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 FREM1Q5H8C1 2179 aa14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 RAI1Q7Z5J4 1906 aaPredicted RBP14.27□□□□□ -0.13
ERGIC3-217ENST00000488935 TLN2Q9Y4G6 2542 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 SERTM1A2A2V5 107 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 EMC8O43402 210 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 CXCL13O43927 109 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 CRHP06850 196 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 IL11P20809 199 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 KIAA0040Q15053 153 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 ZNHIT3Q15649 155 aaPredicted RBP14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 GLE1Q53GS7 698 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 CFAP157Q5JU67 520 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 CCNJQ5T5M9 372 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 SHEQ5VZ18 495 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 FRMD7Q6ZUT3 714 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 SH2D5Q6ZV89 423 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 TRIM46Q7Z4K8 759 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 YTHDF3Q7Z739 585 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 CCDC63Q8NA47 563 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 TSSK3Q96PN8 268 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 SLC39A3Q9BRY0 314 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 TXLNGYQ9BZA5 131 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 PRRG4Q9BZD6 226 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 ZNF226Q9NYT6 803 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 TAS2R7Q9NYW3 318 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 ABCG2Q9UNQ0 655 aa14.26□□□□□ -0.13
ERGIC3-217ENST00000488935 NPIPA5A0A0B4J1W7 369 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 CCDC151A5D8V7 595 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 NPIPA7E9PJI5 369 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 TNFSF11O14788 317 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 PDPK1O15530 556 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 PLIN3O60664 434 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 GOSR1O95249 250 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 NPIPA8P0DM63 369 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 NID1P14543 1247 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 TBXA2RP21731 343 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 SHC1P29353 583 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 CLK3P49761 638 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 NR1H2P55055 460 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 GUSBP1Q15486 140 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 TSC22D1Q15714 1073 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 CTU2Q2VPK5 515 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 METTL25Q8N6Q8 603 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 NUP43Q8NFH3 380 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 OR10D3Q8NH80 312 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 ACMSDQ8TDX5 336 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 ROBO4Q8WZ75 1007 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 ARSGQ96EG1 525 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 C12orf49Q9H741 205 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 SH3BP4Q9P0V3 963 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 DCDC2Q9UHG0 476 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 STK38LQ9Y2H1 464 aa14.25□□□□□ -0.13
ERGIC3-217ENST00000488935 JMJD1CQ15652 2540 aa14.24□□□□□ -0.13
ERGIC3-217ENST00000488935 ANK3Q12955 4377 aaKnown RBP14.24□□□□□ -0.13
ERGIC3-217ENST00000488935 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.24□□□□□ -0.13
ERGIC3-217ENST00000488935 UQCRHLA0A096LP55 91 aa14.24□□□□□ -0.13
ERGIC3-217ENST00000488935 A0A0J9YW62 118 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms