RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CCDC126Q96EE4 140 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
HDAC6-231ENST00000488905 HS3ST6Q96QI5 342 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 PROCRQ9UNN8 238 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 WBP11Q9Y2W2 641 aaKnown RBP16.56■□□□□ 0.24
HDAC6-231ENST00000488905 HIVEP2P31629 2446 aa16.56■□□□□ 0.24
HDAC6-231ENST00000488905 USF3Q68DE3 2245 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 SHISA8B8ZZ34 492 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 G3V2L1 256 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 H3BQF6 201 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 AQP8O94778 261 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 KCNH1O95259 989 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 ANGPTL1O95841 491 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 MYL2P10916 166 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 LOXP28300 417 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-231ENST00000488905 NAA20P61599 178 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 PRR5P85299 388 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 C17orf67Q0P5P2 114 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 TMEM44Q2T9K0 475 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 GRAMD1BQ3KR37 738 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 NOXRED1Q6NXP6 359 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 ZYG11AQ6WRX3 759 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 C20orf204Q6ZNR8 217 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 FAM214BQ7L5A3 538 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 GGNQ86UU5 652 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 ZNF610Q8N9Z0 462 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 ARSGQ96EG1 525 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 Q96MF0 132 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 C3orf14Q9HBI5 128 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 EQTNQ9NQ60 294 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 TBK1Q9UHD2 729 aa16.55■□□□□ 0.24
HDAC6-231ENST00000488905 GXYLT2A0PJZ3 443 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 TTC36A6NLP5 189 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 GMFGO60234 142 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 GLRA3O75311 464 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 CRCPO75575 148 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 IGKV1D-16P01601 117 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 ZNF17P17021 662 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 GABRA3P34903 492 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 HSPB3Q12988 150 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 SGCBQ16585 318 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 PPP4R4Q6NUP7 873 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 PRSS57Q6UWY2 283 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 APOOLQ6UXV4 268 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 YTHDF3Q7Z739 585 aaKnown RBP16.54■□□□□ 0.24
HDAC6-231ENST00000488905 CNPY4Q8N129 248 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 PIK3R3Q92569 461 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 PERPQ96FX8 193 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 TNFRSF12AQ9NP84 129 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 RRAGDQ9NQL2 400 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-231ENST00000488905 DCDC2Q9UHG0 476 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 VDAC3Q9Y277 283 aa16.54■□□□□ 0.24
HDAC6-231ENST00000488905 FREM1Q5H8C1 2179 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 H7C1Q1 480 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 EIF1AYO14602 144 aaKnown RBP16.53■□□□□ 0.24
HDAC6-231ENST00000488905 PDPK1O15530 556 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 EIF1AXP47813 144 aaKnown RBP16.53■□□□□ 0.24
HDAC6-231ENST00000488905 EXOC3L2Q2M3D2 409 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 C22orf34Q6ZV56 151 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 ZNF551Q7Z340 670 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-231ENST00000488905 CIARTQ8N365 385 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-231ENST00000488905 OR6K3Q8NGY3 331 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 PPP1R14CQ8TAE6 165 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 HOXB13Q92826 284 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-231ENST00000488905 EGLN2Q96KS0 407 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 KLHL4Q9C0H6 718 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 STOML1Q9UBI4 398 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 EMC9Q9Y3B6 208 aa16.53■□□□□ 0.24
HDAC6-231ENST00000488905 UQCRHLA0A096LP55 91 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 ALG1L2C9J202 215 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 LY6G6DO95868 133 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 PROCP04070 461 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 TBXA2RP21731 343 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 PRPH2P23942 346 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 GPC1P35052 558 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 MAP3K8P41279 467 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 SLC6A8P48029 635 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 SLC29A2Q14542 456 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 VPS26BQ4G0F5 336 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 CFAP157Q5JU67 520 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 ANKRD34AQ69YU3 496 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 ANKRD26P1Q6NSI1 321 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 GALNT10Q86SR1 603 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 GPR151Q8TDV0 419 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 SLC9A6Q92581 669 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 CIDECQ96AQ7 238 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-231ENST00000488905 ZNF764Q96H86 408 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-231ENST00000488905 GMPPAQ96IJ6 420 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-231ENST00000488905 METTL2AQ96IZ6 378 aaKnown RBP16.52■□□□□ 0.24
HDAC6-231ENST00000488905 PRRG4Q9BZD6 226 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 CCL27Q9Y4X3 112 aa16.52■□□□□ 0.24
HDAC6-231ENST00000488905 ANK3Q12955 4377 aaKnown RBP16.52■□□□□ 0.23
HDAC6-231ENST00000488905 NUP214P35658 2090 aaPredicted RBP16.52■□□□□ 0.23
HDAC6-231ENST00000488905 A0A087WZY1 265 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 SS18L1O75177 396 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-231ENST00000488905 NKX2-2O95096 273 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 OXSR1O95747 527 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-231ENST00000488905 PLGP00747 810 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-231ENST00000488905 THBDP07204 575 aa16.51■□□□□ 0.23
HDAC6-231ENST00000488905 NGFRP08138 427 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms