RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 KCNE3Q9Y6H6 103 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 CCDC168Q8NDH2 2452 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 MAP1AP78559 2803 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 A0A0G2JNJ9 132 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 ALG1L2C9J202 215 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 RNASET2O00584 256 aaKnown RBP12.89□□□□□ -0.35
COL9A2-208ENST00000488463 SCO2O43819 266 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 SASH3O75995 380 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 ACTL6AO96019 429 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 GABRA1P14867 456 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 TBXA2RP21731 343 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 CHRNB4P30926 498 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 KIR3DL1P43629 444 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 UFM1P61960 85 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 SPANXN4Q5MJ08 99 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 FIGNL1Q6PIW4 674 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 POMZP3Q6PJE2 187 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 SZRD1Q7Z422 152 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 ADGRE4PQ86SQ3 457 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 LIX1LQ8IVB5 337 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 TRIM42Q8IWZ5 723 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 DUSP19Q8WTR2 217 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 RND1Q92730 232 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
COL9A2-208ENST00000488463 BTBD2Q9BX70 525 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 ACTRT3Q9BYD9 372 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 DPY30Q9C005 99 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 DSN1Q9H410 356 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 Q9UFV3 132 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 MRTO4Q9UKD2 239 aaKnown RBP12.89□□□□□ -0.35
COL9A2-208ENST00000488463 SNX8Q9Y5X2 465 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 AKAP9Q99996 3911 aa12.89□□□□□ -0.35
COL9A2-208ENST00000488463 GOLGA8QA0A0J9YX86 632 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 PRSS51A0A1B0GVH4 220 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 GOLGA8OA6NCC3 632 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 NPIPB9F8W1W9 429 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 GOLGA8NF8WBI6 632 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 SLCO1B7G3V0H7 640 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 OXSR1O95747 527 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 EPPINO95925 133 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 C1QCP02747 245 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 ALOX5P09917 674 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 KITP10721 976 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 PRF1P14222 555 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 CPN1P15169 458 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 IGFBP2P18065 325 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 DPP4P27487 766 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 PTGER4P35408 488 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 ZFP36L2P47974 494 aaKnown RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 RFX3P48380 749 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 PRIM2P49643 509 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 LHX2P50458 406 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 PSMD4P55036 377 aaKnown RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 DSCR4P56555 118 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 TP53BP2Q13625 1128 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 TOMM20Q15388 145 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 TMEM44Q2T9K0 475 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 CCNJQ5T5M9 372 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 RIPPLY2Q5TAB7 128 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 SPATA19Q7Z5L4 167 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 CLEC4FQ8N1N0 589 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 COX18Q8N8Q8 333 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 OR5AK3PQ8NH89 298 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 PIWIL2Q8TC59 973 aaKnown RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 ACTRT2Q8TDY3 377 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 ASB5Q8WWX0 329 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 CDS1Q92903 461 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 MOAP1Q96BY2 351 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 C7orf26Q96N11 449 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 OR52B2Q96RD2 323 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 KLHDC3Q9BQ90 382 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 UCK2Q9BZX2 261 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 TAS2R10Q9NYW0 307 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 MED11Q9P086 117 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 ANKRD17O75179 2603 aaKnown RBP12.88□□□□□ -0.35
COL9A2-208ENST00000488463 HEATR5AQ86XA9 2040 aa12.88□□□□□ -0.35
COL9A2-208ENST00000488463 TRPC5OSA6NMA1 111 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-208ENST00000488463 E9PBE3 544 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 ANGPTL1O95841 491 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 LCN1P31025 176 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 CLDN18P56856 261 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 RPS26P62854 115 aaKnown RBP12.87□□□□□ -0.35
COL9A2-208ENST00000488463 POU6F2P78424 691 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-208ENST00000488463 STX5Q13190 355 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 DPY19L1Q2PZI1 675 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 FAM174BQ3ZCQ3 159 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 NSUN5P2Q63ZY6 315 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 C6orf120Q7Z4R8 191 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 ANKRD46Q86W74 232 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 IFNEQ86WN2 208 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 OR14L1PQ8NHC6 308 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 GOT1L1Q8NHS2 421 aaPredicted RBP12.87□□□□□ -0.35
COL9A2-208ENST00000488463 ZPLD1Q8TCW7 415 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms