RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 COLEC12Q5KU26 742 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PWWP2BQ6NUJ5 590 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 USP51Q70EK9 711 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ZNF615Q8N8J6 731 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 VANGL1Q8TAA9 524 aaPredicted RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 GIPC3Q8TF64 312 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ZFAND2BQ8WV99 257 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 KCNE4Q8WWG9 221 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PIK3R3Q92569 461 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 MBOAT4Q96T53 435 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 BARD1Q99728 777 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 QRSL1Q9H0R6 528 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 OR10A5Q9H207 317 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PNPLA3Q9NST1 481 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 C14orf105Q9NVL8 296 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 FOXJ2Q9P0K8 574 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 SCOCQ9UIL1 159 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 MKLN1Q9UL63 735 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ZNF443Q9Y2A4 671 aaPredicted RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 NINQ8N4C6 2090 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 A6NHS1 94 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 HRKO00198 91 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 TNFAIP8O95379 198 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 TIAF1O95411 115 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 DBIP07108 87 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 ITGAMP11215 1152 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ANXA8P13928 327 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 TRHRP34981 398 aaPredicted RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 CXADRP78310 365 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 CLN3Q13286 438 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 MICAQ29983 383 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 VWA2Q5GFL6 755 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PCSK4Q6UW60 755 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 DEF8Q6ZN54 512 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 COMTD1Q86VU5 262 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 VRK2Q86Y07 508 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 TMEM151BQ8IW70 566 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ATG16L2Q8NAA4 619 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ZNF555Q8NEP9 628 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 OR4D11Q8NGI4 311 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PHF10Q8WUB8 498 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 PTPMT1Q8WUK0 201 aaPredicted RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 TSLPQ969D9 159 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 CLIP3Q96DZ5 547 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 ART5Q96L15 291 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 VN1R1Q9GZP7 353 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 PNO1Q9NRX1 252 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 SLC22A11Q9NSA0 550 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 FAM118AQ9NWS6 357 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
NELFE-209ENST00000488426 CFL2Q9Y281 166 aa11.78□□□□□ -0.52
NELFE-209ENST00000488426 CFAP46Q8IYW2 2715 aa11.77□□□□□ -0.52
NELFE-209ENST00000488426 GXYLT2A0PJZ3 443 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 EFCAB7A8K855 629 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 C9orf172C9J069 976 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 M0R3H8 397 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 FFAR1O14842 300 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 KCNK2O95069 426 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 CLPSP04118 112 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 PRB1P04280 392 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 H1F0P07305 194 aaKnown RBP11.77□□□□□ -0.53
NELFE-209ENST00000488426 GNAO1P09471 354 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 DCDP81605 110 aaKnown RBP11.77□□□□□ -0.53
NELFE-209ENST00000488426 OCA2Q04671 838 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 KCNAB2Q13303 367 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 LAPTM4AQ15012 233 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 GPR68Q15743 365 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 EXOC3L2Q2M3D2 409 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 ZIK1Q3SY52 487 aaPredicted RBP11.77□□□□□ -0.53
NELFE-209ENST00000488426 LIN52Q52LA3 116 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 CCNJQ5T5M9 372 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 ZNF385CQ66K41 422 aaPredicted RBP11.77□□□□□ -0.53
NELFE-209ENST00000488426 LACC1Q8IV20 430 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 TAGAPQ8N103 731 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 BMPERQ8N8U9 685 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 SLC38A9Q8NBW4 561 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 PIK3C3Q8NEB9 887 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 OR10G2Q8NGC3 310 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 OR6T1Q8NGN1 323 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 OR14A16Q8NHC5 309 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 C16orf52Q8NHV5 167 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 ZG16BQ96DA0 208 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 RNF31Q96EP0 1072 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 SENP5Q96HI0 755 aaPredicted RBP11.77□□□□□ -0.53
NELFE-209ENST00000488426 PRRC1Q96M27 445 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 STRADBQ9C0K7 418 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 EVA1AQ9H8M9 152 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 NMNAT1Q9HAN9 279 aaPredicted RBP11.77□□□□□ -0.53
NELFE-209ENST00000488426 Q9N2J8 555 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 KRT84Q9NSB2 600 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 WDR70Q9NW82 654 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 OCIAD1Q9NX40 245 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 CTSFQ9UBX1 484 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 MKL2Q9ULH7 1088 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 CLCA3PQ9Y6N3 262 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 SEC16AO15027 2179 aa11.77□□□□□ -0.53
NELFE-209ENST00000488426 SDK2Q58EX2 2172 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms