RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	IGLV3-32	A0A0A0MS00	114 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	DEFB108A	A8MXU0	73 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PDPK1	O15530	556 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	AQP8	O94778	261 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SLITRK5	O94991	958 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NKX2-2	O95096	273 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ANGPTL1	O95841	491 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CGA	P01215	116 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	OPN1LW	P04000	364 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RAF1	P04049	648 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PEPD	P12955	493 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CREB1	P16220	341 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CD53	P19397	219 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ALDH3A1	P30838	453 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SLC6A8	P48029	635 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RNF144A	P50876	292 aa	Predicted RBP	10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PRKAG1	P54619	331 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PRR5	P85299	388 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PDE7A	Q13946	482 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GUSBP1	Q15486	140 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	DUSP5	Q16690	384 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	DEFB113	Q30KQ7	82 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	EXOSC6	Q5RKV6	272 aa	Known RBP	10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FBXW10	Q5XX13	1052 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FIGNL1	Q6PIW4	674 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ZCCHC23	Q6ZST2	131 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	P4HA3	Q7Z4N8	544 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GATS	Q8NAP1	163 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GPR151	Q8TDV0	419 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SLC9A6	Q92581	669 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	C3orf30	Q96M34	536 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	WFIKKN1	Q96NZ8	548 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ALPK1	Q96QP1	1244 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CCT7	Q99832	543 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PIGQ	Q9BRB3	760 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	YIPF4	Q9BSR8	244 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PIGM	Q9H3S5	423 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	REEP4	Q9H6H4	257 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ANKZF1	Q9H8Y5	726 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RNF122	Q9H9V4	155 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	KLHL28	Q9NXS3	571 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SH3BP4	Q9P0V3	963 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NTM	Q9P121	344 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SLC17A7	Q9P2U7	560 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	VDAC3	Q9Y277	283 aa		10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235	WBP11	Q9Y2W2	641 aa	Known RBP	10.1	□□□□□ -0.79
PCYT1A-215	ENST00000488235		H3BQF6	201 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SLC28A1	O00337	649 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	MSTN	O14793	375 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PIP5K1B	O14986	540 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RGS14	O43566	566 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	OXSR1	O95747	527 aa	Predicted RBP	10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PRPS2	P11908	318 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	BCKDHA	P12694	445 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	IL11	P20809	199 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GPC1	P35052	558 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GANAB	Q14697	944 aa	Known RBP	10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PON3	Q15166	354 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	GALNTL6	Q49A17	601 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ARL13A	Q5H913	290 aa	Predicted RBP	10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CCNJ	Q5T5M9	372 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	RNF165	Q6ZSG1	346 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ZNF550	Q7Z398	422 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	BANP	Q8N9N5	519 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	EIF1AD	Q8N9N8	165 aa	Known RBP	10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ZNF610	Q8N9Z0	462 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	NUP43	Q8NFH3	380 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FAM110B	Q8TC76	370 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	AGR3	Q8TD06	166 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	TWIST2	Q8WVJ9	160 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ZNF524	Q96C55	264 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PPCDC	Q96CD2	204 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PGM2	Q96G03	612 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	ZNF764	Q96H86	408 aa	Predicted RBP	10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	POM121	Q96HA1	1249 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	METTL2A	Q96IZ6	378 aa	Known RBP	10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	FAM111A	Q96PZ2	611 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	HS3ST6	Q96QI5	342 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	SMR3A	Q99954	134 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	L2HGDH	Q9H9P8	463 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	CLEC4A	Q9UMR7	237 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	TLN2	Q9Y4G6	2542 aa		10.09	□□□□□ -0.79
PCYT1A-215	ENST00000488235	PRR14L	Q5THK1	2151 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	TLDC2	A0PJX2	215 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	ALG1L2	C9J202	215 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	CTIF	O43310	598 aa	Known RBP	10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	OIP5	O43482	229 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	TBX19	O60806	448 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	TRIM13	O60858	407 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	SPAG7	O75391	227 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	TNFRSF21	O75509	655 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	KCNK2	O95069	426 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	KCNH1	O95259	989 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	IFI6	P09912	130 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	HOXB4	P17483	251 aa	Predicted RBP	10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	PSMA4	P25789	261 aa	Known RBP	10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	LOX	P28300	417 aa	Predicted RBP	10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	HOXC12	P31275	282 aa		10.08	□□□□□ -0.8
PCYT1A-215	ENST00000488235	MANF	P55145	182 aa	Known RBP	10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms