RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 GRXCR2A6NFK2 248 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 TRIM64BA6NI03 449 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 WASH4PA8MWX3 477 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 RP2O75695 350 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 H2AFB2P0C5Z0 115 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 NTRK2Q16620 822 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 OR9K2Q8NGE7 335 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 TANKQ92844 425 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 SYNPO2LQ9H987 977 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 CSNK1G1Q9HCP0 422 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 EBF1Q9UH73 591 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 PCDHA9Q9Y5H5 950 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 RFXAPO00287 272 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 ARHGEF15O94989 841 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 HOXD9P28356 352 aaPredicted RBP13.17□□□□□ -0.3
TFAM-204ENST00000487519 DCTP40126 519 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 ERVFC1P60507 584 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 PRPS1P60891 318 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 GOLM1Q8NBJ4 401 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 CLEC1AQ8NC01 280 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 OR13J1Q8NGT2 312 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 TMEM239Q8WW34 195 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 TRMT2BQ96GJ1 504 aaKnown RBP13.17□□□□□ -0.3
TFAM-204ENST00000487519 EGLN2Q96KS0 407 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 OR6C2Q9NZP2 312 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 SRPK3Q9UPE1 567 aa13.17□□□□□ -0.3
TFAM-204ENST00000487519 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
TFAM-204ENST00000487519 UBL4AP11441 157 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 PRR18Q8N4B5 295 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 ARRDC2Q8TBH0 407 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 NANOS1Q8WY41 292 aaKnown RBP13.16□□□□□ -0.3
TFAM-204ENST00000487519 SGCZQ96LD1 299 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 TREX1Q9NSU2 369 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 PISDQ9UG56 409 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 SPEF1Q9Y4P9 236 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 USP3Q9Y6I4 520 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 PNMTP11086 282 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 C6orf183Q5T699 404 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 CFAP77Q6ZQR2 320 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 TM9SF4Q92544 642 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
TFAM-204ENST00000487519 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 A0A0A6YYH2 397 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 A6NJ64 397 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 OR1D4P47884 311 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 EIF2S3LQ2VIR3 472 aaKnown RBP13.16□□□□□ -0.3
TFAM-204ENST00000487519 MTFR2Q6P444 385 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 ANKLE1Q8NAG6 615 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 OR9A4Q8NGU2 314 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 OR4K3Q96R72 315 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 TMEM168Q9H0V1 697 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 PCDH10Q9P2E7 1040 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 LOC285095A0A1B0GVY8 99 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 LRRTM2O43300 516 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 ACTL6BO94805 426 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 IFNA5P01569 189 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 AMY2AP04746 511 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 STT3AP46977 705 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 PTH2RP49190 550 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 EPHA4P54764 986 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 ZNF33BQ06732 778 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 PTPRRQ15256 657 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 DCST2Q5T1A1 773 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 TMEM205Q6UW68 189 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 SLC35F2Q8IXU6 374 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 ZNF300Q96RE9 604 aaPredicted RBP13.16□□□□□ -0.3
TFAM-204ENST00000487519 ZNF160Q9HCG1 818 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 POT1Q9NUX5 634 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 MAB21L2Q9Y586 359 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
TFAM-204ENST00000487519 DNAJB5O75953 348 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 F3P13726 295 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 DNASE1P24855 282 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 ERVK-25P63136 954 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 EEF1A1P68104 462 aaKnown RBP13.15□□□□□ -0.3
TFAM-204ENST00000487519 RBM12BQ8IXT5 1001 aaKnown RBP13.15□□□□□ -0.3
TFAM-204ENST00000487519 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 CACNG6Q9BXT2 260 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 NXF5Q9H1B4 397 aaKnown RBP13.15□□□□□ -0.3
TFAM-204ENST00000487519 MYH8P13535 1937 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 ANKRD28O15084 1053 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 LCKP06239 509 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 RETP07949 1114 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.3
TFAM-204ENST00000487519 RAB41Q5JT25 222 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 TANGO2Q6ICL3 276 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 ALG8Q9BVK2 526 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 TAAR2Q9P1P5 351 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 CCL26Q9Y258 94 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 YARS2Q9Y2Z4 477 aaKnown RBP13.15□□□□□ -0.3
TFAM-204ENST00000487519 PRKYO43930 277 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 C1orf105O95561 183 aa13.15□□□□□ -0.3
TFAM-204ENST00000487519 IFNA2P01563 188 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms