RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 C3orf30Q96M34 536 aa17.26■□□□□ 0.35
CLIP2-206ENST00000487091 PIGMQ9H3S5 423 aa17.26■□□□□ 0.35
CLIP2-206ENST00000487091 RASSF1Q9NS23 344 aa17.26■□□□□ 0.35
CLIP2-206ENST00000487091 ZDHHC2Q9UIJ5 367 aa17.26■□□□□ 0.35
CLIP2-206ENST00000487091 AKAP6Q13023 2319 aa17.26■□□□□ 0.35
CLIP2-206ENST00000487091 CELSR1Q9NYQ6 3014 aa17.26■□□□□ 0.35
CLIP2-206ENST00000487091 AKAP9Q99996 3911 aa17.26■□□□□ 0.35
CLIP2-206ENST00000487091 TUBAL3A6NHL2 446 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 ANGPTL1O95841 491 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 ACP2P11117 423 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLIP2-206ENST00000487091 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 C6orf136Q5SQH8 315 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 RAET1LQ5VY80 246 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 MFSD12Q6NUT3 480 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 APOOLQ6UXV4 268 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 EXOC3L1Q86VI1 746 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 MEIOBQ8N635 442 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 SLC16A11Q8NCK7 471 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 PIGQQ9BRB3 760 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 POLDIP3Q9BY77 421 aaKnown RBP17.25■□□□□ 0.35
CLIP2-206ENST00000487091 GIMAP2Q9UG22 337 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 ZNF337Q9Y3M9 751 aa17.25■□□□□ 0.35
CLIP2-206ENST00000487091 A0A1W2PRB8 838 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 OR2M5A3KFT3 312 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 A6NNC1 897 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 ALG1L2C9J202 215 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 CTIFO43310 598 aaKnown RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 TNFRSF21O75509 655 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 KCNK2O95069 426 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 HSPA4LO95757 839 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 TGM6O95932 706 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 CRHP06850 196 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 ALOX5P09917 674 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 EPXP11678 715 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 TBXA2RP21731 343 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 PRIM2P49643 509 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 DUSP5Q16690 384 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 EXOSC6Q5RKV6 272 aaKnown RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 PLXDC2Q6UX71 529 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 SZRD1Q7Z422 152 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 NUDCD3Q8IVD9 361 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 OR7A2PQ8NGA2 310 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 OR4C3Q8NH37 302 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 PSMA8Q8TAA3 256 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 FAM120BQ96EK7 910 aaKnown RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 PRPF18Q99633 342 aaKnown RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 GPATCH1Q9BRR8 931 aaKnown RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 RBM24Q9BX46 236 aaKnown RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 SIRT3Q9NTG7 399 aaPredicted RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 ATAD3AQ9NVI7 634 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 GIN1Q9NXP7 522 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 V9GYY5 206 aaPredicted RBP17.24■□□□□ 0.35
CLIP2-206ENST00000487091 HIVEP1P15822 2718 aa17.24■□□□□ 0.35
CLIP2-206ENST00000487091 ABCA4P78363 2273 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 ZNF500O60304 480 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-206ENST00000487091 OXSR1O95747 527 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-206ENST00000487091 LAMP1P11279 417 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 EFNA1P20827 205 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-206ENST00000487091 PRPS1L1P21108 318 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 DNAJA1P31689 397 aaKnown RBP17.23■□□□□ 0.35
CLIP2-206ENST00000487091 SERPINB4P48594 390 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 DIO3P55073 304 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 CLDN15P56746 228 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 OCRLQ01968 901 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 TMEM44Q2T9K0 475 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 KRT71Q3SY84 523 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 CPTPQ5TA50 214 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 IL23RQ5VWK5 629 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 OR2A2Q6IF42 318 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 P4HA3Q7Z4N8 544 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 GCNT2Q8N0V5 402 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 FNDC5Q8NAU1 212 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 OR5P2Q8WZ92 322 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 TUBGCP3Q96CW5 907 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 COQ8BQ96D53 544 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 C16orf58Q96GQ5 468 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 ZIM3Q96PE6 472 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 STACQ99469 402 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 CLEC4MQ9H2X3 399 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-206ENST00000487091 SSU72Q9NP77 194 aaKnown RBP17.23■□□□□ 0.35
CLIP2-206ENST00000487091 DUSP22Q9NRW4 184 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 ZCCHC3Q9NUD5 404 aaKnown RBP17.23■□□□□ 0.35
CLIP2-206ENST00000487091 AP4B1Q9Y6B7 739 aa17.23■□□□□ 0.35
CLIP2-206ENST00000487091 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 A0A1W2PNV4 684 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 SLC22A20A6NK97 555 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 A8MXE2 369 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 RGS16O15492 202 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-206ENST00000487091 NDUFB5O43674 189 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 SKAP2O75563 359 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-206ENST00000487091 TNFSF13O75888 250 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 SOX30O94993 753 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 GOSR1O95249 250 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 HMGN2P05204 90 aaKnown RBP17.22■□□□□ 0.35
CLIP2-206ENST00000487091 ZNF844Q08AG5 666 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 PTGR1Q14914 329 aa17.22■□□□□ 0.35
CLIP2-206ENST00000487091 LSM12Q3MHD2 195 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms