RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PUDPQ08623 228 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 CYP51A1Q16850 503 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 Q1RN00 199 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 LINC01620Q4KN68 170 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 DCST2Q5T1A1 773 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 SULT1C3Q6IMI6 304 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 SCYL2Q6P3W7 929 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 LRRC70Q7Z2Q7 622 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 HSD11B1LQ7Z5J1 315 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 NAXDQ8IW45 347 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 SLC39A11Q8N1S5 342 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 DTNBP1Q96EV8 351 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 AKR1E2Q96JD6 320 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 RANBP9Q96S59 729 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 SLC30A2Q9BRI3 323 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 OPN3Q9H1Y3 402 aaPredicted RBP2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 RIBC2Q9H4K1 309 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 DHX33Q9H6R0 707 aaKnown RBP2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 CALHM2Q9HA72 323 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 FARSBQ9NSD9 589 aaKnown RBP2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 TMOD2Q9NZR1 351 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 CYTH4Q9UIA0 394 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 GMPPBQ9Y5P6 360 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 METP08581 1390 aa2.7□□□□□ -1.98
SNRNP27-204ENST00000487029 SF3B1O75533 1304 aaKnown RBP eCLIP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 A8MX80 341 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 TRIM3O75382 744 aaPredicted RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 SLC2A10O95528 541 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 MBD3O95983 291 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 PCCBP05166 539 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 HSPA5P11021 654 aaKnown RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 EPB41P11171 864 aaKnown RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 UMPSP11172 480 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 XRCC1P18887 633 aaPredicted RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 PSMA2P25787 234 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 RPL4P36578 427 aaKnown RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 PAX2Q02962 417 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 ELP6Q0PNE2 266 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 TAF7Q15545 349 aaPredicted RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 TIMM50Q3ZCQ8 353 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 STAC2Q6ZMT1 411 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 LANCL3Q6ZV70 420 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 ANKRD37Q7Z713 158 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 P2RY8Q86VZ1 359 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 IFNEQ86WN2 208 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 GRAMD2AQ8IUY3 354 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 BPIFB2Q8N4F0 458 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 Q8N9G6 341 aaPredicted RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 ZSCAN4Q8NAM6 433 aaPredicted RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 RHOXF1Q8NHV9 184 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 TYMSOSQ8TAI1 123 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 PPP1R16AQ96I34 528 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 C4orf36Q96KX1 117 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 CASD1Q96PB1 797 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 TMEM121Q9BTD3 319 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 TM2D1Q9BX74 207 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 POLR3FQ9H1D9 316 aaPredicted RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 UTP6Q9NYH9 597 aaKnown RBP2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 EHFQ9NZC4 300 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 RSPH14Q9UHP6 348 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 CRLS1Q9UJA2 301 aa2.69□□□□□ -1.98
SNRNP27-204ENST00000487029 PRRC2AP48634 2157 aaKnown RBP2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 USP6P35125 1406 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 POGZQ7Z3K3 1410 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 PPIAL4CA0A0B4J2A2 164 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 ZSCAN5BA6NJL1 495 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 FAM74A7A6NL05 159 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 FAM220BPB1ANY3 271 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 CTAGE5O15320 804 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 OPN1LWP04000 364 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 PPIAL4GP0DN37 164 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 PRG2P13727 222 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 PGAM2P15259 253 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 CDH5P33151 784 aaPredicted RBP2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 SOX6P35712 828 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 HSD17B7P56937 341 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 NTHL1P78549 312 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 NUCB2P80303 420 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 BDH1Q02338 343 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 ATXN7L3Q14CW9 347 aaPredicted RBP2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 CHI3L2Q15782 390 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 TPD52L1Q16890 204 aaPredicted RBP2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 CCDC57Q2TAC2 916 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 USH1GQ495M9 461 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 FAM74A3Q4VXF1 159 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 ATAD3CQ5T2N8 411 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 NCR3LG1Q68D85 454 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 ZNF57Q68EA5 555 aaPredicted RBP2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 SLC25A24Q6NUK1 477 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 ZNF774Q6NX45 483 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 C2orf66Q6UXQ4 117 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 BAIAP2L2Q6UXY1 529 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 CYS1Q717R9 158 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 ARMCX2Q7L311 632 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 DPY19L4Q7Z388 723 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 HSCBQ8IWL3 235 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 THRSPQ92748 146 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 SDSLQ96GA7 329 aa2.68□□□□□ -1.98
SNRNP27-204ENST00000487029 OR5M11Q96RB7 305 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms