RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 REM1O75628 298 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 CBX7O95931 251 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 NPIPA8P0DM63 369 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 TPSB2P20231 275 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 PTAFRP25105 342 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 APOBEC3AP31941 199 aaPredicted RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 PPICP45877 212 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 EMDP50402 254 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 CDK16Q00536 496 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 E2F2Q14209 437 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 SLMAPQ14BN4 828 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 TRIP10Q15642 601 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 TPSAB1Q15661 275 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 KCTD19Q17RG1 926 aaPredicted RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 PRICKLE4Q2TBC4 344 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 GLYR1Q49A26 553 aaPredicted RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 HSP90AA5PQ58FG0 334 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 OR52E8Q6IFG1 317 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 FAM111BQ6SJ93 734 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 TMEM108Q6UXF1 575 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 Q6ZT83 130 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 SSX8Q7RTT4 187 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 GLCCI1Q86VQ1 547 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 TUSC5Q8IXB3 177 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 LAS2Q8IYD9 372 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 RNF175Q8N4F7 328 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 CCDC89Q8N998 374 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 ADCY4Q8NFM4 1077 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 CALML6Q8TD86 181 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 RNF128Q8TEB7 428 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 ABHD3Q8WU67 409 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 MUCL1Q96DR8 90 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 SLC6A7Q99884 636 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 EGFL8Q99944 293 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 TMEM79Q9BSE2 394 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 EFCAB11Q9BUY7 163 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 SUCNR1Q9BXA5 334 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 CAPS2Q9BXY5 557 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 CDC42EP4Q9H3Q1 356 aaKnown RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 SMYD2Q9NRG4 433 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 ACSS1Q9NUB1 689 aaPredicted RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 C20orf96Q9NUD7 363 aaPredicted RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 HIF1ANQ9NWT6 349 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 IFNKQ9P0W0 207 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 PPP4R1LQ9P1A2 415 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 KLHL13Q9P2N7 655 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 CORO1CQ9ULV4 474 aaPredicted RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 CFL2Q9Y281 166 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 HIF3AQ9Y2N7 669 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 GPR55Q9Y2T6 319 aaPredicted RBP7.22□□□□□ -1.25
XRN1-212ENST00000486211 PLLPQ9Y342 182 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 OARD1Q9Y530 152 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 OR5H1A6NKK0 313 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 B4DSR2 109 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 TAPBPO15533 448 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 SLU7O95391 586 aaKnown RBP7.21□□□□□ -1.26
XRN1-212ENST00000486211 SYNGR4O95473 234 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 CCDC175P0C221 793 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 CPMP14384 443 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 PGCP20142 388 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 COX5AP20674 150 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 NT5EP21589 574 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 EDNRAP25101 427 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 ZNF83P51522 516 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 SNX1Q13596 522 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 CCNIQ14094 377 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 EFR3AQ14156 821 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 SHQ1Q6PI26 577 aaKnown RBP7.21□□□□□ -1.26
XRN1-212ENST00000486211 Q6ZPA2 131 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 P2RY8Q86VZ1 359 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 C1QL4Q86Z23 238 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 OR2W6PQ8NHA6 318 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 TMEM186Q96B77 213 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 RGMAQ96B86 450 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 CMTM7Q96FZ5 175 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 NPAS1Q99742 590 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 FAM167BQ9BTA0 163 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 FRMD8P1Q9BZ68 369 aaPredicted RBP7.21□□□□□ -1.26
XRN1-212ENST00000486211 IARS2Q9NSE4 1012 aaKnown RBP7.21□□□□□ -1.26
XRN1-212ENST00000486211 LYARQ9NX58 379 aaKnown RBP7.21□□□□□ -1.26
XRN1-212ENST00000486211 PAQR5Q9NXK6 330 aaPredicted RBP7.21□□□□□ -1.26
XRN1-212ENST00000486211 MAT2BQ9NZL9 334 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 PRSS50Q9UI38 385 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 PACSIN2Q9UNF0 486 aaPredicted RBP7.21□□□□□ -1.26
XRN1-212ENST00000486211 SLC25A15Q9Y619 301 aa7.21□□□□□ -1.26
XRN1-212ENST00000486211 LOC105371242A0A075B767 164 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 A0A0J9YW62 118 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 AKR1B15C9JRZ8 316 aaPredicted RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 TNFSF11O14788 317 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 CLGNO14967 610 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 SCO2O43819 266 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 FADS1O60427 444 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 EIF4EBP3O60516 100 aaPredicted RBP7.2□□□□□ -1.26
XRN1-212ENST00000486211 MFAP3LO75121 409 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 CLDN9O95484 217 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 AHSGP02765 367 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 OPN1LWP04000 364 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 FAM58BPP0C7Q3 252 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 CT45A8P0DMV1 189 aa7.2□□□□□ -1.26
XRN1-212ENST00000486211 CT45A9P0DMV2 189 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms