RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PTBP3O95758 552 aaKnown RBP2.11□□□□□ -2.07
GCFC2-209ENST00000486016 CCDC166P0CW27 439 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 TOP1P11387 765 aaKnown RBP2.11□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF44P15621 663 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 FUT1P19526 365 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 AXLP30530 894 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 PRDX2P32119 198 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 SAA4P35542 130 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 OR3A4PP47883 348 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 CAMLGP49069 296 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 RAG2P55895 527 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 GABPB1Q06547 395 aaPredicted RBP2.11□□□□□ -2.07
GCFC2-209ENST00000486016 SNX1Q13596 522 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 PDIA5Q14554 519 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 LRIT3Q3SXY7 679 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 ASPHD2Q6ICH7 369 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 ATRAIDQ6UW56 229 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 RBM43Q6ZSC3 357 aaKnown RBP2.11□□□□□ -2.07
GCFC2-209ENST00000486016 RANBP3LQ86VV4 465 aaPredicted RBP2.11□□□□□ -2.07
GCFC2-209ENST00000486016 GPBP1Q86WP2 473 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 MINDY2Q8NBR6 621 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 OR4F17Q8NGA8 305 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 OR56B1Q8NGI3 324 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 LHX4Q969G2 390 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 C14orf79Q96F83 325 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 OR4F4Q96R69 305 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 TMEM231Q9H6L2 316 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 ALG9Q9H6U8 611 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 BCAP29Q9UHQ4 241 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 CLCA3PQ9Y6N3 262 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 NPIPA5A0A0B4J1W7 369 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 A0A0J9YVX5 310 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 BICDL2A1A5D9 508 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 NPIPA5E9PKD4 350 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 H3BMH7 237 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 EI24O14681 340 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 LCMT2O60294 686 aaKnown RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 PDE5AO76074 875 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ECDO95905 644 aaPredicted RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 GSTA1P08263 222 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 GHRP10912 638 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 RALAP11233 206 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ASMTP46597 345 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 GMFBP60983 142 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 HAND2P61296 217 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 RPS8P62241 208 aaKnown RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 SPP2Q13103 211 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ORC2Q13416 577 aaPredicted RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 CEBPEQ15744 281 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ACSF3Q4G176 576 aaPredicted RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 LDLRAP1Q5SW96 308 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 RAET1GQ6H3X3 334 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 GOLGA7Q7Z5G4 137 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 FAM71CQ8NEG0 241 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 WDR36Q8NI36 951 aaKnown RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 DLX4Q92988 240 aaPredicted RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 SLC35E1Q96K37 410 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 KCNK16Q96T55 309 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 APOOQ9BUR5 198 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 NMNAT2Q9BZQ4 307 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 RAB17Q9H0T7 212 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 Q9H3A6 140 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ROPN1Q9HAT0 212 aaPredicted RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 NGBQ9NPG2 151 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ESM1Q9NQ30 184 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ACTR3BQ9P1U1 418 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 PURGQ9UJV8 347 aaKnown RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF490Q9ULM2 529 aaPredicted RBP2.1□□□□□ -2.07
GCFC2-209ENST00000486016 FZR1Q9UM11 496 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 FKBP7Q9Y680 259 aa2.1□□□□□ -2.07
GCFC2-209ENST00000486016 RLFQ13129 1914 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 IGKV2D-24A0A075B6R9 120 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.09□□□□□ -2.07
GCFC2-209ENST00000486016 PDLIM1O00151 329 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 LGALS8O00214 317 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF324O75467 553 aaPredicted RBP2.09□□□□□ -2.07
GCFC2-209ENST00000486016 HPNP05981 417 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 ARF4P18085 180 aaPredicted RBP2.09□□□□□ -2.07
GCFC2-209ENST00000486016 DNAJB1P25685 340 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 RFC2P35250 354 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 PMELP40967 661 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 CD86P42081 329 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 CAV2P51636 162 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 PARP6Q2NL67 630 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 PAQR9Q6ZVX9 377 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 C9orf40Q8IXQ3 194 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 ARFGAP2Q8N6H7 521 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 CCDC71LQ8N9Z2 235 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF540Q8NDQ6 660 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 OR52J3Q8NH60 311 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 FCGR1BQ92637 280 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 NCLNQ969V3 563 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 TSPAN18Q96SJ8 248 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 TSPY26PQ9H489 355 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 NANOGQ9H9S0 305 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 MBD2Q9UBB5 411 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 SLC2A6Q9UGQ3 507 aa2.09□□□□□ -2.07
GCFC2-209ENST00000486016 ASTN1O14525 1302 aa2.09□□□□□ -2.08
GCFC2-209ENST00000486016 LRIT2A6NDA9 550 aa2.08□□□□□ -2.08
GCFC2-209ENST00000486016 C19orf81C9J6K1 198 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms