RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ACTRT2Q8TDY3 377 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 NTNG2Q96CW9 530 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 MARK4Q96L34 752 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 OR7D2Q96RA2 312 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 OR52E6Q96RD3 313 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 TRIB1Q96RU8 372 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 SH3GL2Q99962 352 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 KCNJ16Q9NPI9 418 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 UBQLN4Q9NRR5 601 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 DUSP22Q9NRW4 184 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 GIN1Q9NXP7 522 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 RNF6Q9Y252 685 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 USH1CQ9Y6N9 552 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 CROCCQ5TZA2 2017 aa11.38□□□□□ -0.59
PTCD1-205ENST00000485746 RELNP78509 3460 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 DUXAA6NLW8 204 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 GTPBP1O00178 669 aaKnown RBP11.37□□□□□ -0.59
PTCD1-205ENST00000485746 SLC22A3O75751 556 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 OXSR1O95747 527 aaPredicted RBP11.37□□□□□ -0.59
PTCD1-205ENST00000485746 SNRPB2P08579 225 aaKnown RBP11.37□□□□□ -0.59
PTCD1-205ENST00000485746 COX6B1P14854 86 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 IDO1P14902 403 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 TBXA2RP21731 343 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 GRNP28799 593 aaKnown RBP11.37□□□□□ -0.59
PTCD1-205ENST00000485746 MAP3K8P41279 467 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 DGKQP52824 942 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 CASP9P55211 416 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 WNT3P56703 355 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 STX1BP61266 288 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 GSTA3Q16772 222 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTCD1-205ENST00000485746 NHSL2Q5HYW2 709 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 DCST2Q5T1A1 773 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 ATAD3BQ5T9A4 648 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 RTL6Q6ICC9 239 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 ZNF621Q6ZSS3 439 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 TRIML2Q8N7C3 387 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 OR2M3Q8NG83 312 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 OR4C3Q8NH37 302 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 FAM110BQ8TC76 370 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 HOXB13Q92826 284 aaPredicted RBP11.37□□□□□ -0.59
PTCD1-205ENST00000485746 WDYHV1Q96HA8 205 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 HOXD1Q9GZZ0 328 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 EXD2Q9NVH0 621 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 GPATCH2Q9NW75 528 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 FBXO34Q9NWN3 711 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 MRPS18CQ9Y3D5 142 aaKnown RBP11.37□□□□□ -0.59
PTCD1-205ENST00000485746 FAM215AQ9Y5M1 114 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 GPR45Q9Y5Y3 372 aa11.37□□□□□ -0.59
PTCD1-205ENST00000485746 POLEQ07864 2286 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 HSPB2A8KAH6 182 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 C17orf51A8MQB3 221 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 C9JVG2 144 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 H3BNH8 94 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 ANKRD28O15084 1053 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 POLR3GO15318 223 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 HNRNPRO43390 633 aaKnown RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 IL2RAP01589 272 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 CHMP24386 653 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 STARP49675 285 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 RPS26P62854 115 aaKnown RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 LRRC74AQ0VAA2 488 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 GANABQ14697 944 aaKnown RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 HSPB2Q16082 182 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 ACSF3Q4G176 576 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 FLYWCH1Q4VC44 716 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 PDCD4Q53EL6 469 aaKnown RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 DCST1Q5T197 706 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 RIPPLY2Q5TAB7 128 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 C16orf62Q7Z3J2 963 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 ZAR1Q86SH2 424 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 FADS6Q8N9I5 356 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 GLB1L3Q8NCI6 653 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 OR5D16Q8NGK9 328 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 LILRB4Q8NHJ6 448 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 PHOSPHO1Q8TCT1 267 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 RNF138Q8WVD3 245 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 XAGE5Q8WWM1 108 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 SH3YL1Q96HL8 342 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-205ENST00000485746 TEX37Q96LM6 180 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 C7orf26Q96N11 449 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 PANX1Q96RD7 426 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 PIGQQ9BRB3 760 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 SLC35A5Q9BS91 424 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 UCK2Q9BZX2 261 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 OR51I1Q9H343 314 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 STOML1Q9UBI4 398 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 BTNL2Q9UIR0 455 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 KCNE3Q9Y6H6 103 aa11.36□□□□□ -0.59
PTCD1-205ENST00000485746 NPIPA5A0A0B4J1W7 369 aa11.35□□□□□ -0.59
PTCD1-205ENST00000485746 NKX2-6A6NCS4 301 aa11.35□□□□□ -0.59
PTCD1-205ENST00000485746 CCDC154A6NI56 674 aa11.35□□□□□ -0.59
PTCD1-205ENST00000485746 ALG1L2C9J202 215 aa11.35□□□□□ -0.59
PTCD1-205ENST00000485746 NPIPA7E9PJI5 369 aa11.35□□□□□ -0.59
PTCD1-205ENST00000485746 ZIC3O60481 467 aa11.35□□□□□ -0.59
PTCD1-205ENST00000485746 TGDSO95455 350 aa11.35□□□□□ -0.59
PTCD1-205ENST00000485746 ANP32DO95626 131 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms