RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 KIAA0040Q15053 153 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 GUSBP1Q15486 140 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 ACKR1Q16570 336 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 SGCBQ16585 318 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 GLYR1Q49A26 553 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-205ENST00000485397 ANKRD26P1Q6NSI1 321 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 FRMD7Q6ZUT3 714 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 GALNT10Q86SR1 603 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 EXOC3L1Q86VI1 746 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 IFT20Q8IY31 132 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 PIGTQ969N2 578 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 GFM2Q969S9 779 aaKnown RBP17.29■□□□□ 0.36
COL27A1-205ENST00000485397 MARK4Q96L34 752 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 PIP5K1AQ99755 562 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 TXLNGYQ9BZA5 131 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 C3orf14Q9HBI5 128 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 PROCRQ9UNN8 238 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 PTGDR2Q9Y5Y4 395 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 AP4B1Q9Y6B7 739 aa17.29■□□□□ 0.36
COL27A1-205ENST00000485397 IGLV3-32A0A0A0MS00 114 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 GLRA3O75311 464 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 SEC22BO75396 215 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 LOXP28300 417 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-205ENST00000485397 SLC6A8P48029 635 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 PRR5P85299 388 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 TMEM44Q2T9K0 475 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 CFAP157Q5JU67 520 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 PPP4R4Q6NUP7 873 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 SH2D5Q6ZV89 423 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 IKBIPQ70UQ0 350 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 GGNQ86UU5 652 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 LRRC75A-AS1Q8N1F1 130 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 CIARTQ8N365 385 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-205ENST00000485397 GPR151Q8TDV0 419 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 CIDECQ96AQ7 238 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-205ENST00000485397 KLHL4Q9C0H6 718 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 C12orf65Q9H3J6 166 aaKnown RBP17.28■□□□□ 0.36
COL27A1-205ENST00000485397 CLEC4AQ9UMR7 237 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 VDAC3Q9Y277 283 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 ARID1AO14497 2285 aa17.28■□□□□ 0.36
COL27A1-205ENST00000485397 EIF1AYO14602 144 aaKnown RBP17.27■□□□□ 0.36
COL27A1-205ENST00000485397 KCNH1O95259 989 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 PRPS2P11908 318 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 TBXA2RP21731 343 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 GPC1P35052 558 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 PRKAG1P54619 331 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 DNAJB13P59910 316 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 FGFBP1Q14512 234 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 EXOC3L2Q2M3D2 409 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 ZNF385BQ569K4 471 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 CLEC6AQ6EIG7 209 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 FAM214BQ7L5A3 538 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 SLC9A6Q92581 669 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 CCL19Q99731 98 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 NPAS1Q99742 590 aa17.27■□□□□ 0.36
COL27A1-205ENST00000485397 ABCA2Q9BZC7 2435 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 TTC36A6NLP5 189 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 H3BQF6 201 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 PDPK1O15530 556 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 AKAP10O43572 662 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 PLIN3O60664 434 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 NKX2-2O95096 273 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 LY6G6DO95868 133 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 OPN1LWP04000 364 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 IFI6P09912 130 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 UROSP10746 265 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 FPR1P21462 350 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 MAP3K8P41279 467 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 EIF1AXP47813 144 aaKnown RBP17.26■□□□□ 0.35
COL27A1-205ENST00000485397 NAA20P61599 178 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 OCRLQ01968 901 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 GSPT2Q8IYD1 628 aaKnown RBP17.26■□□□□ 0.35
COL27A1-205ENST00000485397 GATSQ8NAP1 163 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 OR4C3Q8NH37 302 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 FBXO30Q8TB52 745 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 HOXB13Q92826 284 aaPredicted RBP17.26■□□□□ 0.35
COL27A1-205ENST00000485397 Q96MF0 132 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 RHOXF2Q9BQY4 288 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 PRRG4Q9BZD6 226 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 LRTM1Q9HBL6 345 aa17.26■□□□□ 0.35
COL27A1-205ENST00000485397 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 ALG1L2C9J202 215 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 H7C1Q1 480 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 OXSR1O95747 527 aaPredicted RBP17.25■□□□□ 0.35
COL27A1-205ENST00000485397 HEXAP06865 529 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 THBDP07204 575 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 ACP2P11117 423 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 FCGR2AP12318 317 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 PRPH2P23942 346 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL27A1-205ENST00000485397 CCDC153Q494R4 210 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 FIGNL1Q6PIW4 674 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 Q6ZSR9 355 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 ZAR1Q86SH2 424 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 CCDC63Q8NA47 563 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 NUP43Q8NFH3 380 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 OR10D3Q8NH80 312 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 PPP1R14CQ8TAE6 165 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 ARSGQ96EG1 525 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 GIMAP5Q96F15 307 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms