RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 LAIR1Q6GTX8 287 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 COX15Q7KZN9 410 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 HMGN2P46Q86SG4 172 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 GTF2IRD2Q86UP8 949 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 CLIP4Q8N3C7 705 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 DAZLQ92904 295 aaKnown RBP24.32■■□□□ 1.48
SHOX2-204ENST00000483851 PNO1Q9NRX1 252 aaKnown RBP24.32■■□□□ 1.48
SHOX2-204ENST00000483851 PCDHGA10Q9Y5H3 936 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 SLC1A7O00341 560 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 AP3D1O14617 1153 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 CT45A8P0DMV1 189 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 CT45A9P0DMV2 189 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 PSMD4P55036 377 aaKnown RBP24.32■■□□□ 1.48
SHOX2-204ENST00000483851 TUBA3CQ13748 450 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 NSDHLQ15738 373 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 NKAIN1Q4KMZ8 207 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 CT45A2Q5DJT8 189 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 TCEAL6Q6IPX3 200 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 PWWP2BQ6NUJ5 590 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 FIGNL1Q6PIW4 674 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 AGBL5Q8NDL9 886 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 TSLPQ969D9 159 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 TCEAL3Q969E4 200 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 HRASLS5Q96KN8 279 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 SLC22A11Q9NSA0 550 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 RLIMQ9NVW2 624 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 BLOC1S6Q9UL45 172 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 GPR55Q9Y2T6 319 aaPredicted RBP24.32■■□□□ 1.48
SHOX2-204ENST00000483851 GMPPBQ9Y5P6 360 aa24.32■■□□□ 1.48
SHOX2-204ENST00000483851 LNP1A1A4G5 178 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 SH3PXD2BA1X283 911 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 H3BMQ9 156 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 IGKV3-11P04433 115 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 CCNYL3P0C7X3 344 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 CDK4P11802 303 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 SLC37A1P57057 533 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 DCDP81605 110 aaKnown RBP24.31■■□□□ 1.48
SHOX2-204ENST00000483851 OCA2Q04671 838 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 ST3GAL3Q11203 375 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 FLYWCH1Q4VC44 716 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 AQP11Q8NBQ7 271 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 OR9Q2Q8NGE9 314 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 SLC35B4Q969S0 331 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 CLIP3Q96DZ5 547 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 COG8Q96MW5 612 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 VN1R1Q9GZP7 353 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 FER1L5A0AVI2 2057 aa24.31■■□□□ 1.48
SHOX2-204ENST00000483851 TAS2R41P59536 307 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 GPR107Q5VW38 600 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 NPSR1Q6W5P4 371 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 SLC7A13Q8TCU3 470 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 RHBDD1Q8TEB9 315 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 DGCR6LQ9BY27 220 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 FBXO34Q9NWN3 711 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 PAK1IP1Q9NWT1 392 aaPredicted RBP24.3■■□□□ 1.48
SHOX2-204ENST00000483851 FTSJ1Q9UET6 329 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 MKL2Q9ULH7 1088 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 DTX4Q9Y2E6 619 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 CDHR4A6H8M9 788 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 FMO6PO60774 539 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 ATE1O95260 518 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 CYC1P08574 325 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 PPICP45877 212 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 NUP107P57740 925 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 DCAF7P61962 342 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 MAPK14Q16539 360 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.3■■□□□ 1.48
SHOX2-204ENST00000483851 ZNF385CQ66K41 422 aaPredicted RBP24.3■■□□□ 1.48
SHOX2-204ENST00000483851 RANBP3LQ86VV4 465 aaPredicted RBP24.3■■□□□ 1.48
SHOX2-204ENST00000483851 STT3BQ8TCJ2 826 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 DIO2Q92813 273 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 NIPSNAP1Q9BPW8 284 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 MAN2C1Q9NTJ4 1040 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 KCNE5Q9UJ90 142 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 CBLCQ9ULV8 474 aa24.3■■□□□ 1.48
SHOX2-204ENST00000483851 OR5F1O95221 314 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 TRAM2Q15035 370 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 ZNF141Q15928 474 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 PRR23CQ6ZRP0 262 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 GRAMD2AQ8IUY3 354 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 SLC38A9Q8NBW4 561 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 SLC38A4Q969I6 547 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 ITPAQ9BY32 194 aa24.29■■□□□ 1.48
SHOX2-204ENST00000483851 ASCC3Q8N3C0 2202 aaKnown RBP24.28■■□□□ 1.48
SHOX2-204ENST00000483851 POLR1CO15160 346 aaPredicted RBP24.28■■□□□ 1.48
SHOX2-204ENST00000483851 CYP7B1O75881 506 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 TIAF1O95411 115 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 DDAH2O95865 285 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 GASTP01350 101 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 RPP38P78345 283 aaKnown RBP24.28■■□□□ 1.48
SHOX2-204ENST00000483851 MRPL2Q5T653 305 aaKnown RBP24.28■■□□□ 1.48
SHOX2-204ENST00000483851 OVCH1Q7RTY7 1134 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 MORN4Q8NDC4 146 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 SLC2A12Q8TD20 617 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 ZNF721Q8TF20 911 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 MCHR1Q99705 422 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 NAA50Q9GZZ1 169 aaKnown RBP24.28■■□□□ 1.48
SHOX2-204ENST00000483851 OCIAD1Q9NX40 245 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 CTSFQ9UBX1 484 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 OR10H1Q9Y4A9 318 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms