RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 RFX3P48380 749 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 MRPS11P82912 194 aaKnown RBP7.35□□□□□ -1.23
COL4A5-205ENST00000483338 OC90Q02509 493 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-205ENST00000483338 NDUFAF6Q330K2 333 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 TKFCQ3LXA3 575 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 PAPD4Q6PIY7 484 aaKnown RBP7.35□□□□□ -1.23
COL4A5-205ENST00000483338 BCDIN3DQ7Z5W3 292 aaKnown RBP7.35□□□□□ -1.23
COL4A5-205ENST00000483338 MON1AQ86VX9 555 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 NR2C2APQ86WQ0 139 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 LRRC28Q86X40 367 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-205ENST00000483338 SLITRK4Q8IW52 837 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 UBAC2Q8NBM4 344 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 GPRC5AQ8NFJ5 357 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 OR9Q2Q8NGE9 314 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 OR56A4Q8NGH8 313 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 FUBP3Q96I24 572 aaKnown RBP eCLIP7.35□□□□□ -1.23
COL4A5-205ENST00000483338 TPD52L3Q96J77 140 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF558Q96NG5 402 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 OR1F2PQ96R84 312 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 ATOH8Q96SQ7 321 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 NFKBIZQ9BYH8 718 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 WDR13Q9H1Z4 485 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 SMCO4Q9NRQ5 59 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 FNDC3AQ9Y2H6 1198 aaKnown RBP7.35□□□□□ -1.23
COL4A5-205ENST00000483338 KCNIP3Q9Y2W7 256 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 RAI2Q9Y5P3 530 aa7.35□□□□□ -1.23
COL4A5-205ENST00000483338 GBF1Q92538 1859 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 BLOC1S5-TXNDC5H3BN57 136 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 TNFRSF11BO00300 401 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 SLC7A4O43246 635 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 SLC28A2O43868 658 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 AGTR2P50052 363 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 HTR6P50406 440 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 DGCR2P98153 550 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 GFOD2Q3B7J2 385 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 FNDC3BQ53EP0 1204 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ARSIQ5FYB1 569 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OR2W3Q7Z3T1 314 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 DNAJB7Q7Z6W7 309 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OAFQ86UD1 273 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 COMTD1Q86VU5 262 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 TMEM130Q8N3G9 435 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 KRTCAP2Q8N6L1 136 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 RTL3Q8N8U3 475 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 PNPLA2Q96AD5 504 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 R3HDM4Q96D70 268 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OSMRQ99650 979 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 GPR20Q99678 358 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ALG8Q9BVK2 526 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 SEC11CQ9BY50 192 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 TMEM231Q9H6L2 316 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ASF1BQ9NVP2 202 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OPN4Q9UHM6 478 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 FBXL3Q9UKT7 428 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 IMPA2O14732 288 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 DPM1O60762 260 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 PIGRP01833 764 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 EDN1P05305 212 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 HOXB5P09067 269 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 EPXP11678 715 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 HOXA5P20719 270 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 RBMS1P29558 406 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 KDELR2P33947 212 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF140P52738 457 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 HGFACQ04756 655 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ABHD18Q0P651 414 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 RSU1Q15404 277 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OR2G6Q5TZ20 316 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 AFMIDQ63HM1 303 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 C18orf63Q68DL7 685 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 SFRP4Q6FHJ7 346 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 CD200R1LQ6Q8B3 271 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 LDB1Q86U70 411 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 FJX1Q86VR8 437 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 C4orf19Q8IY42 314 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ZFP41Q8N8Y5 198 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 FAM71CQ8NEG0 241 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 C3orf49Q96BT1 292 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 CDK15Q96Q40 435 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 TMEM208Q9BTX3 173 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 PINK1Q9BXM7 581 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OR10A4Q9H209 315 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 BCO1Q9HAY6 547 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 CACYBPQ9HB71 228 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF69Q9UC07 566 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ZDHHC8Q9ULC8 765 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 A0A1B0GUH1 482 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ZAR1LA6NP61 321 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 WNT9AO14904 365 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 DLEU1O43261 78 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 MT-ND4LP03901 98 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ADH1AP07327 375 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 HMBSP08397 361 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 UBBP0CG47 229 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 UBCP0CG48 685 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 CPN1P15169 458 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 HTR2AP28223 471 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 IRS1P35568 1242 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 F2RL1P55085 397 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 BACE1P56817 501 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms