RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 IMPDH1P20839 514 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 DPP4P27487 766 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 MC3RP41968 323 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 SERPINB4P48594 390 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 NCBP2P52298 156 aaKnown RBP eCLIP8.13□□□□□ -1.11
HLA-B-253ENST00000481849 FOXA1P55317 472 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 TPD52P55327 224 aaPredicted RBP8.13□□□□□ -1.11
HLA-B-253ENST00000481849 CLDN18P56856 261 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 SIRPAP78324 504 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 SORDQ00796 357 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 C2orf80Q0P641 193 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 LCP2Q13094 533 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 EFR3AQ14156 821 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 HEPACAMQ14CZ8 416 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 DEFB113Q30KQ7 82 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 SPIN4Q56A73 249 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 RAET1LQ5VY80 246 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 TMEM107Q6UX40 140 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 CAMKMTQ7Z624 323 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 POU5F2Q8N7G0 328 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 GBP7Q8N8V2 638 aaPredicted RBP8.13□□□□□ -1.11
HLA-B-253ENST00000481849 MNS1Q8NEH6 495 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 WFDC11Q8NEX6 87 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 ZNF675Q8TD23 568 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 DSN1Q9H410 356 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 PLEKHF2Q9H8W4 249 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 MID1IP1Q9NPA3 183 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 FLRT3Q9NZU0 649 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 MED11Q9P086 117 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 C6orf203Q9P0P8 240 aaPredicted RBP8.13□□□□□ -1.11
HLA-B-253ENST00000481849 CLCF1Q9UBD9 225 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 TBK1Q9UHD2 729 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 POLR3HQ9Y535 204 aaPredicted RBP8.13□□□□□ -1.11
HLA-B-253ENST00000481849 ZNF407Q9C0G0 2248 aa8.13□□□□□ -1.11
HLA-B-253ENST00000481849 NCKAP5O14513 1909 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 TMEM238LA0A1B0GVL6 79 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 A0A1W2PNV4 684 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 A0A1W2PPR1 153 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 SLC22A20A6NK97 555 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 UBFD1O14562 309 aaKnown RBP8.12□□□□□ -1.11
HLA-B-253ENST00000481849 CASKO14936 926 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 RIPK2O43353 540 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 ZIC3O60481 467 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 CRCPO75575 148 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 HRGP04196 525 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 ENO1P06733 434 aaKnown RBP8.12□□□□□ -1.11
HLA-B-253ENST00000481849 HK1P19367 917 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 EVI2BP34910 448 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 MPIP34949 423 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 PNLIPRP2P54317 469 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 PRKAA2P54646 552 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 GAS1P54826 345 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 DIO3P55073 304 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 PKNOX1P55347 436 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 FAM27E3Q08E93 113 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 IMPG1Q17R60 797 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 RPS26P11Q5JNZ5 115 aaPredicted RBP8.12□□□□□ -1.11
HLA-B-253ENST00000481849 HIST2H2BDQ6DRA6 164 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 PPP4R4Q6NUP7 873 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 VWA1Q6PCB0 445 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 TIFABQ6ZNK6 161 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 CHMP1BQ7LBR1 199 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 ADGRE4PQ86SQ3 457 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 SAMD14Q8IZD0 417 aaPredicted RBP8.12□□□□□ -1.11
HLA-B-253ENST00000481849 SMPDL3BQ92485 455 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 FIG4Q92562 907 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 L3HYPDHQ96EM0 354 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 FAM111AQ96PZ2 611 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 CITED4Q96RK1 184 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 SMR3AQ99954 134 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 SHCBP1LQ9BZQ2 653 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 OPN3Q9H1Y3 402 aaPredicted RBP8.12□□□□□ -1.11
HLA-B-253ENST00000481849 PIGMQ9H3S5 423 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 GSTO2Q9H4Y5 243 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 MIEF1Q9NQG6 463 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 KLHL28Q9NXS3 571 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 TAS2R9Q9NYW1 312 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 PACSIN3Q9UKS6 424 aa8.12□□□□□ -1.11
HLA-B-253ENST00000481849 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 A0A1W2PPM1 405 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 CCDC151A5D8V7 595 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 A8MXE2 369 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 MYO1GB0I1T2 1018 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 H3BML4 177 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 PLOD3O60568 738 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 COQ9O75208 318 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 TNFSF13O75888 250 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 ABHD2P08910 425 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 FAM153BP0C7A2 387 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 MYL2P10916 166 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 CD53P19397 219 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 DDCP20711 480 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 CHMP24386 653 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 NTSP30990 170 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 KCNJ5P48544 419 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 DSCR4P56555 118 aaPredicted RBP8.11□□□□□ -1.11
HLA-B-253ENST00000481849 B3GALT5-AS1P59052 145 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 MRPS22P82650 360 aaKnown RBP8.11□□□□□ -1.11
HLA-B-253ENST00000481849 PSG6Q00889 435 aa8.11□□□□□ -1.11
HLA-B-253ENST00000481849 ID3Q02535 119 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms